Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0470 ATGGCCGCACCTTCGGAGCTTCACTTGCCACCGGGCTTCAGATTCCATCCCACCGATGATGAGCTCGTCATGCACTATCTCTGCCGAAAATGTGCCTCCCAACCTATAGCCATCCCCGTCATTGCTGAAATCGACCTTTACAAGTACGATCCCTGGGACCTTCCCGGCAAGGCTCTGTATGGAGAGAAGGAGTGGTACTTCTTCTCGCCCAGGGACCGCAAATATCCCAACGGTTCCAGGCCGAACCGCGCTGCCGGCACGGGGTACTGGAAGGCCACCGGGGCTGACAAACCCATCGGACTTCCGAAACCCGTCGGGATCAAGAAAGCCCTGGTTTTCTACTCGGGGAAAGCGCCCAAAGGGGAGAAAACCAATTGGATTATGCACGAGTATCGTCTGGCCGACGTGGATCGCTCCGCTCGCAAAAACAACACCTTGAGGCTGGATGATTGGGTGCTTTGCCGAATATACAACAAGAAGGGCATTATTGAGAAACAACCGACGGTTGGCAGCCCCAAAACTGAATGGTCTGAAATCGTGGACAACAAGCCGGAAAACGTATCTCTCTGTATTAGAATTCCCCGGCATCATCCTCATGCCGCGGCTGCGACCGATCACTTGAACTTTGACAAGTCGGATTCAGTCCCGAAGCTGCACACGGAGTCGAGCTGCTCCGAGCATGTCGTATCGCCAGAGTTTGCAAGCGAGGTGCAGAGCGAACCCAAGTGGAGTGAGTGGGAAAAACACCTTGAGTTTCCATATAATTACGCGGGCGCCACCATGAACAACGGTTTCGAGTCTCAGGCTCAGTTGATCCTGAGCAATAATCAGATGTGGCCGTTGCAGGACATTTTCATGCCCTTCTGA 867 0.5375 MAAPSELHLPPGFRFHPTDDELVMHYLCRKCASQPIAIPVIAEIDLYKYDPWDLPGKALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGLPKPVGIKKALVFYSGKAPKGEKTNWIMHEYRLADVDRSARKNNTLRLDDWVLCRIYNKKGIIEKQPTVGSPKTEWSEIVDNKPENVSLCIRIPRHHPHAAAATDHLNFDKSDSVPKLHTESSCSEHVVSPEFASEVQSEPKWSEWEKHLEFPYNYAGATMNNGFESQAQLILSNNQMWPLQDIFMPF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0470 288 PANTHER NAC TRANSCRIPTION FACTOR 56 9 211 - -
Prci15g0470 288 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Prci15g0470 288 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Prci15g0470 288 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Prci15g0470 288 FunFam NAC transcription factor 18 163 - -
Prci15g0470 288 Pfam No apical meristem (NAM) protein 10 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0470 Prci-Chr15 2974772 2976601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0470 7 286 NAC Transcription Factor Family AT1G01720 68.858 7.67e-140 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci15g0470 NAM 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0470 - - gmx:100805768 446.047