Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0466 ATGTTTTTGTCCTTCTTCTATTCATGTCAATTTTTGGATCAAGGAGAGATGTGCCTTGGGTTTTATAACAGAAAGGTTATAAATTTTTGTAAGATTATAGAACCACTTGCTTCAAGGTGTGCAAAATTCAGGTTTAAGCTGCTGTCAAAAGAAATCATGAGCAGTCGAATACTGTACATTTGCAAAGAAGAAGGACTTAATCTTGATTCTGAGGCTCTTTCAAACCTTGGCTCCATTTCTCAAGGGGATCTCCGTAGGGCTATTACATACTTGCAGTTATTTGAGGCCATTGTTGAAGCAGATGATATATCAGATGAACAGAAAGCAAGAATATCCAAGAAATTGGCTGAAGCTGATAAGCTTCTTGACGTGGCCGGCAATACAATTCGAGCTTGTTGTAACATGCCAGAGGGATTTTCTTTCGAGGGCTAG 432 0.3889 MFLSFFYSCQFLDQGEMCLGFYNRKVINFCKIIEPLASRCAKFRFKLLSKEIMSSRILYICKEEGLNLDSEALSNLGSISQGDLRRAITYLQLFEAIVEADDISDEQKARISKKLAEADKLLDVAGNTIRACCNMPEGFSFEG 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0466 143 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 30 123 - -
Prci15g0466 143 Gene3D - 50 118 - -
Prci15g0466 143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 96 IPR027417 -
Prci15g0466 143 CDD HLD_clamp_RFC 48 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0466 Prci-Chr15 2949379 2952771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0466 92 139 Core DNA Replication Machinery Family AT1G21690 48.333 6.71e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0466 K10755 - pcin:129294640 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0466 15 2949379 2952771 Prci15g0466 15 2949379 2952771 ECH