Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0465 ATGTTTTTGTCCTTCTTCTATTCATGTCAATTTTTGGATCAAGGAGAGATGTGCCTTGGGTTTTATAACAGAAAGGTTATAAATTTTTGTAAGATTATAGAACCACTTGCTTCAAGGTGTGCAAAATTCAGGTTTAAGCTGCTGTCAAAAGAAATCATGAGCAGTCGAATACTGTACATTTGCAAAGAAGAAGGACTTAATCTTGATTCTGAGGCTCTTTCAAACCTTGGCTCCATTTCTCAAGGGGATCTCCGTAGGGCTATTACATACTTGCAGGCGAGTTATTTGAGGCCATTGTTGAAGCAGATGATATATCAGATGAACAGAAAGCAAGAATATCCAAGAAATTGGCTGAAGCTGATAAGCTTCTTGACGTGGCCGGCAATACAATTCGAGCTTGTTGTAACATGCCAGAGGGATTTTCTTTCGAGGGCTAGATGA 441 0.3923 MFLSFFYSCQFLDQGEMCLGFYNRKVINFCKIIEPLASRCAKFRFKLLSKEIMSSRILYICKEEGLNLDSEALSNLGSISQGDLRRAITYLQASYLRPLLKQMIYQMNRKQEYPRNWLKLISFLTWPAIQFELVVTCQRDFLSRAR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0465 146 CDD HLD_clamp_RFC 48 95 - -
Prci15g0465 146 Gene3D - 49 108 - -
Prci15g0465 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 99 IPR027417 -
Prci15g0465 146 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 30 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0465 Prci-Chr15 2949379 2952771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0465 31 94 Core DNA Replication Machinery Family AT1G21690 79.688 9.46e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0465 K10755 - pcin:129294640 296.975