Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0462 ATGGCCGAAGATGCTCAGAATGCTCTGCGTCGTACAATGGAGACTTACTCTAAGGTTACAAGGTTCTTTTTTATATGCAATTACATTAGTAGGTTTAAGCTGCTGTCAAAAGAAATCATGAGCAGTCGAATACTGTACATTTGCAAAGAAGAAGGACTTAATCTTGATTCTGAGGCTCTTTCAAACCTTGGCTCCATTTCTCAAGGGGATCTCCGTAGGGCTATTACATACTTGCAGGCGAGTTATTTGAGGCCATTGTTGAAGCAGATGATATATCAGATGAACAGAAAGCAAGAATATCCAAGAAATTGGCTGAAGCTGATAAGCTTCTTGACGTGGCCGGCAATACAATTCGAGCTTGTTGTAACATGCCAGAGGGATTTTCTTTCGAGGGCTAGATGA 402 0.4129 MAEDAQNALRRTMETYSKVTRFFFICNYISRFKLLSKEIMSSRILYICKEEGLNLDSEALSNLGSISQGDLRRAITYLQASYLRPLLKQMIYQMNRKQEYPRNWLKLISFLTWPAIQFELVVTCQRDFLSRAR 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0462 133 CDD HLD_clamp_RFC 35 82 - -
Prci15g0462 133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 86 IPR027417 -
Prci15g0462 133 Gene3D - 42 94 - -
Prci15g0462 133 Gene3D - 1 41 IPR027417 -
Prci15g0462 133 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0462 Prci-Chr15 2948185 2952771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0462 1 81 Core DNA Replication Machinery Family AT1G21690 72.340 2.75e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0462 K10755 - pcin:129294640 206.068