Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0460 ATGGCCGAAGATGCTCAGAATGCTCTGCGTCGTACAATGGAGACTTACTCTAAGGTTACAAGGTTTAAGCTGCTGTCAAAAGAAATCATGAGCAGTCGAATACTGTACATTTGCAAAGAAGAAGGACTTAATCTTGATTCTGAGGCTCTTTCAAACCTTGGCTCCATTTCTCAAGGGGATCTCCGTAGGGCTATTACATACTTGCAGGCGAGTTATTTGAGGCCATTGTTGAAGCAGATGATATATCAGATGAACAGAAAGCAAGAATATCCAAGAAATTGGCTGAAGCTGATAAGCTTCTTGACGTGGCCGGCAATACAATTCGAGCTTGTTGTAACATGCCAGAGGGATTTTCTTTCGAGGGCTAGATGA 372 0.4274 MAEDAQNALRRTMETYSKVTRFKLLSKEIMSSRILYICKEEGLNLDSEALSNLGSISQGDLRRAITYLQASYLRPLLKQMIYQMNRKQEYPRNWLKLISFLTWPAIQFELVVTCQRDFLSRAR 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0460 123 CDD HLD_clamp_RFC 25 72 - -
Prci15g0460 123 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 20 89 - -
Prci15g0460 123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 77 IPR027417 -
Prci15g0460 123 Gene3D - 27 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0460 Prci-Chr15 2948184 2952771 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0460 1 71 Core DNA Replication Machinery Family AT1G21690 61.702 5.11e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0460 K10755 - pcin:129294640 206.068