Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0458 ATGACGTCCCTCACTGCTATTGATCTAAAAATATTGTTAACCCACAATTGTTTGTTGTCTTATGAGTTTTATCTGATGAGTTTCCTGAGGCCCTCAGCATTGTACGCCTTTCTTATTACTTGTCCTTCCTTCAGATGGATGCCCTGTCAGAGTTGGGGCTTTCTTCGATGGCCCGGTCTCGATGGCTTCTTGAGACTTTTGGTGATGTTCCTTCTCTGGTCTATGTTTTTGGAGCTTCGCTTCATACCTTCATCTTCTATGTATCCTACTCTTACTGTCGGCGATCGAATAATTGTTGAGAAGGCTTCATACTATATCAGGAGTCCTGTCGTACAGGATATTGTATTATTCCGAGATCCAACACAGCTATCTGAAGACAAAGCGGCAGATATATTTATCAAAAGAGTTGTTGCAAAAGCGGGAGATTTTGTTGAGGTTCATCATGGGTCTCTCTACATCAATGGTGTTGCTCAGAAGGAAGATTATGTAGCGGCACGGCCAACATATACAACAAACTTAACTCATGTACCAAACGGTCATGTTTATGTGTTAGGTGACAATCGAAACAACAGCTATGATTCCCATGTTTGGGGACCACTGCCTGTCAAAAACATAGTGGGGAGATATGTCCTGTGTTGTCACAGACCCACAAATATCTGA 660 0.4227 MTSLTAIDLKILLTHNCLLSYEFYLMSFLRPSALYAFLITCPSFRWMPCQSWGFLRWPGLDGFLRLLVMFLLWSMFLELRFIPSSSMYPTLTVGDRIIVEKASYYIRSPVVQDIVLFRDPTQLSEDKAADIFIKRVVAKAGDFVEVHHGSLYINGVAQKEDYVAARPTYTTNLTHVPNGHVYVLGDNRNNSYDSHVWGPLPVKNIVGRYVLCCHRPTNI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0458 219 PRINTS Bacterial leader peptidase 1 (S26A) family signature 75 91 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci15g0458 219 PRINTS Bacterial leader peptidase 1 (S26A) family signature 176 195 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci15g0458 219 PRINTS Bacterial leader peptidase 1 (S26A) family signature 132 144 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci15g0458 219 FunFam Peptidase/ serine-type peptidase 84 213 - -
Prci15g0458 219 SUPERFAMILY LexA/Signal peptidase 75 212 IPR036286 -
Prci15g0458 219 ProSitePatterns Signal peptidases I serine active site. 84 91 IPR019756 GO:0004252|GO:0016020
Prci15g0458 219 PANTHER SIGNAL PEPTIDASE I 62 216 IPR000223 GO:0006508|GO:0008236|GO:0016020
Prci15g0458 219 Pfam Signal peptidase, peptidase S26 63 211 IPR019533 GO:0004252|GO:0006465
Prci15g0458 219 CDD S26_SPase_I 78 208 IPR019533 GO:0004252|GO:0006465
Prci15g0458 219 ProSitePatterns Signal peptidases I signature 3. 181 194 IPR019758 GO:0004252|GO:0016020
Prci15g0458 219 Gene3D Umud Fragment, subunit A 84 216 - -
Prci15g0458 219 NCBIfam signal peptidase I 65 211 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0458 Prci-Chr15 2938133 2942779 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0458 87 208 MADS-box Gene Family AT1G29960 30.081 2.03e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0458 K03100 - gmx:100306121 323.168