Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0450 ATGGCCAAGCCATTGATCTTCCTCTCCCTCCACACCTCCCTCATCTTCACCATCTCGCTTGCTGCTTCACCTCCTCCTCCTTCTTCCTCCTGTCCCTTTGATCTCACCTACGTCCTAACCTTCCCCTGGGACACTTCAACTTGCCTCCAACTTGACCCAAAAAATGGAACCCAACACTGCTGCCAAACCCTCCTCAGCCTCTTCGGGGTTGGACTTGCTCAGCACCTCAAAGATACCTCCGTCTTCGAACTTCCCGATGCAAACTCTTCCTCTTCTTGCCTCTCCGATTTTAGTACCAAGCTTGCAGCTCTGTCAATCCACGCCGATATGGTCTCTACTTGCTTCCATAACTCTACCCAGTTCGTTACCAATACCTCGAGCTGTGCAGGAATTGAAACCATCCAAGATTTTAATTCAAAGGTTGGCTTGATGTCACCTCTTGATACATCTTGTAATGGTGACCTCACGGGGCTAACTCGGTGCGGTATTTGCCTTGATGCTGGCTTGAAGGTCACTTCCCAATTGAGTGCTAGGGATCCAAACTCCACTAAATGTTTCTACTTCACAGTCTTATATGCTGCTGCTATTGTTAACAACTTTGGTCCTAAAGATGTTAGAACAGCTAGTTGCATACTTGGTATGCCTCTGTCTAGTGCTGGAAGGAAAGGGTCGTCTGACAGAGAACGTACTCTGAAGCTGAGTTTTGGGTTACTGGGCGCTGTTATTGGTATTCTTCTTGCTTTTGTTCTGATTATTATCTACAGGAAGTGGGATAGGAGGAGGAGGGAGAATATTTATCACAGGGAAGTTGTGAGCAGCGTGAGGGCCAGCGTTTTGCCTTACACTGGGGCGAAATGGTTTCATTTGTCAGAGCTTGAAAAAGCCACCGATAAGTTTTCGCAAAGGAATCTGATCGGTCAAGGATCTGATGGGATTGTGTACAAAGGGACTCTTCAGGATGGTGCTTTGGTAGCAGTTAAAGAGATTTTTGATTTGGAAACCAAAGGGGACGAGGAGTTTTGCTATGAAGTGGAGATCATCAGCAAAATAAAGCACAGGAATCTTGTTGCTCTTCGAGGTTGTTGTGTCACTAGTGACAACTCCAAAGGTAAAAGGAGATTTTTGGTTTATGATTACATGCCGAATGGTAGCCTCAGTTACCAATTATCCGTTTCCGGAGCTAACAGGCTAACATGGCCACAGAGAAAGAACATAATTCTCGATGTGGCTAAAGGGCTCGCTTATCTGCATTACGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCCACGAACATACTTCTAGACTCCGCAATGAAAGCTAAGGTGGCAGATTTTGGATTGGCCAAGCAAGGCAATGAAGGCCAGTCTCATCTCACCACAAGGGTTGCTGGCACCTATGGTTATTTAGCACCAGAGTATGCTCTCTACGGGCAACTAACCGAGAAAAGTGATGTTTATAGCTTTGGCATTCTGATTCTCGAAATCATGAGCGGAAGAAAGGTGCTTGACACTTCAAATTCATCGGTTCTTTTGATCACAGACTGGGCTTGGACGCATGCGAAATCAGGCAAGATAGAGGAAATATTGGACGAGTCAATAAGAGAAGGAGGGCCGAAGAGGATAATGGAGAGGTTTGTTTTCGTTGGGATTCTCTGTGCTCATGTGATGGTGGCTTTGAGGCCTACTATTTCTGAGGCCCTCAAGATGCTAGAAGGTGACATTGACATTCCCAATTTACCAGACAGACCAGTGCCTCTGGGCCACGAGTCCTTTCAATCTTCTCTTTTGTATGGCTTTCCAGGGAGTGGAAGATCTACACCGTTCAGTTCATCCGTTCAAGTGTGA 1851 0.4608 MAKPLIFLSLHTSLIFTISLAASPPPPSSSCPFDLTYVLTFPWDTSTCLQLDPKNGTQHCCQTLLSLFGVGLAQHLKDTSVFELPDANSSSSCLSDFSTKLAALSIHADMVSTCFHNSTQFVTNTSSCAGIETIQDFNSKVGLMSPLDTSCNGDLTGLTRCGICLDAGLKVTSQLSARDPNSTKCFYFTVLYAAAIVNNFGPKDVRTASCILGMPLSSAGRKGSSDRERTLKLSFGLLGAVIGILLAFVLIIIYRKWDRRRRENIYHREVVSSVRASVLPYTGAKWFHLSELEKATDKFSQRNLIGQGSDGIVYKGTLQDGALVAVKEIFDLETKGDEEFCYEVEIISKIKHRNLVALRGCCVTSDNSKGKRRFLVYDYMPNGSLSYQLSVSGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSAMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGILILEIMSGRKVLDTSNSSVLLITDWAWTHAKSGKIEEILDESIREGGPKRIMERFVFVGILCAHVMVALRPTISEALKMLEGDIDIPNLPDRPVPLGHESFQSSLLYGFPGSGRSTPFSSSVQV 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0450 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Prci15g0450 616 Gene3D Transferase(Phosphotransferase) domain 1 380 578 - -
Prci15g0450 616 FunFam Receptor-like serine/threonine-protein kinase At4g25390 264 379 - -
Prci15g0450 616 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 380 580 - -
Prci15g0450 616 SUPERFAMILY Protein kinase-like (PK-like) 283 588 IPR011009 -
Prci15g0450 616 CDD STKc_IRAK 305 574 - -
Prci15g0450 616 SMART serkin_6 299 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0450 616 ProSiteProfiles Protein kinase domain profile. 299 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0450 616 Pfam Protein kinase domain 300 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0450 616 PANTHER OS01G0750732 PROTEIN 45 580 - -
Prci15g0450 616 Pfam SPARK 27 185 IPR043891 -
Prci15g0450 616 Gene3D Phosphorylase Kinase; domain 1 262 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0450 Prci-Chr15 2890469 2892608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0450 27 594 Receptor kinase-like Gene Family AT1G11050 54.110 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Prci15g0450 Pkinase 7.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0450 - - mtr:25482441 910.983