Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0427 ATGGGCTTGTGTGAGAGAATGGCGATGGTAGATGAAGCCGCAGGCGAGTCTGTTATCATGCAGCATTGTTCGGAGTTTTCATTGCAATCTGTTCCCGTGGAGCGGTCCTGTTCAAAAGTAGGCTGCTCTGTGTTGGACTCTAACATTGAGCTTTCCAATATTCTGGATGGTTGTAAATATTTCTCTGCTAATGAAGAATCTGGTTCGGCATGCTGTGTTGATGTTACTGACATGCCCAGCAATGCTAGAGCAAGTAAATATGAAAATGCTGATATGTTGCTAGTGAAGAAAACCTCGGACAATGATTGTCATAACTGTTGCAGCACATTTTGTGGGCAATGTGAAGTTTCTAACTTGGAAAGTGGTAGCTTATGCTCAGAAGAAAAAACTCACAATCATGATGACTATCAACTTCCATCAGAGTTTAAATCTGTAAATGGTTTGCTAAAGGATATGAAGAGCAGCACAATCCTTTCTACAGGGGACACAATAGTGGCTGCGGAAGAAAAAAACAATGATGTTGGTTTGCTCACTGACGCTGGCAATTATATATTTGATTTCATTCATTCTGAATTTTCCATGGAATCAGAACCTATAACTGGCTGTCTAGTTAATTTTGACGAAAAGAGTGAGCAGGAGGACATTCTGAGAAATACAGATCCCTTGGAGGTTGTAGACAACTGCAATACTTTATGTGGGGTGAAAGAAACTTCCTGCAGGCAGATATCTCCTGCACAGGGTAGTGAGGTGCCTTCAGAGGCATTATATACAGATGCTTTATGTGGGATGGAAGTGGTTGTTTGCAACCAAACATCTTCAAAGGACAATTTGCCAGAAACTTCTACCTATCGTACCTTTTCTTCTGAATCAGGTCTGCCCTCCTTTGTTTCTTTAAATGATAACCCTTCAAAGGATGTGCCTGATCTCCTGCTCAAGGACAATAGCTGTGATATCAGTTACAATAGCAATGCGTGCAATTCTGGACAGAATGATAATGGAGGAAAACAAATTTTCAGAATTGATCGTGTCACTGGAAGCAAATGTTCAGACATTGTGTTATTGCCTCATCGAAGGAACAGTCAACGAAACAAATCTGTTTGCAAGCAACAGACTGGAAGGGCTCCAAAAAAATGCAATAAGCAAGCCAATGTGCCTCAACAGGAGTGGGGTGTGAAGACAATATCAAAGGCCACTAGAAAGAAAAGAAGCTGTTTCTCCAGAGCTGCTCGCTCTTCTAAGTGGGGATTGCTAGGGAACATTAAACAGGCTGTTGGAATGGATAGAGAGTTAAACATAAATAAAGTTATCTTTGAAGGATTGAGGAAGGATAGGGGCAACTATCAAAGTGGAAAAACAAATAAAGATAGTGCAAATTCTAGCATATTGAATTCAATGCCTGGTGCTTCAACTACTCGTATGCGTTTGAAGATCAAAGTGGGGAAAGGGTTTAACTTGTATTACCCGAACTTCTTGGTCCCGCAAGCCGTTGATGGTTTGGCTTCTATTTCCAACTTGGGACCTAGTTCAAGCTGTCAAAATTTAGTTAGTGATACTGGAGACAAATTATTTGATGAGGTGGTTGTAGGAAAGTTTGAATCTGATAAAAATAACCTTTACAAGCATGCTGTTGTTTTGAATGGGCAAGTTGCCAATAACAAGTTGGAAAGTGCTGCATTAATGGAGAAGTCAGATGCCAATGCAGAGGAGCCTTGTCTTCTGGCTCCTTCAAAGAAGTTGGTTGATGCATTGGTAGAGCCTGTTAATATTGAGCGTATGGATCCTGGAACTGGATCTTCACCTGATTCAGAAGTGATTGATTCAATTCCTGATTTCCAGGTGGGAGAAAGACATCAAAAATATCTGAATAATACTGATTTTGGTTCTTCTACGGAGTTTAATTTTGCTGTTCATGATACTGCTAGCAAGGGAAGGAAGAAGAAAGATAAAGTTGCTTGTTCATGTAATAGTAGTGTAAGAGACGTATCACCAGGTTTCCCAAGGAAAAATAAAGCAAAGTACTCAAAGAATCTTGAAAGTAAGAAGAGCTGCACTGATGTGGTTAGCTCTGTGGAGTTGCCTAGTTCCATTGATATGCATACATTAAGCATAAGCAGTTTTGTAGGCTATGGAGAAGTTCATACAAAACCATTGCACCTCTACGGAGATATTGGACTTAGAGATCCAACTGATGCTTTGGAAGTCAAAAGTAGAGTGGAGGTTAAGACACAGTGCTGCTTAGATATTAACAATGAAAATTCAGACTCCCCTGATACTGAGAAATTTCTTCCATCTGAGAGACATTTGGGTTGTAAAATTCCCAAAAGTCTTAAATCTAACAATGTTAGCCAGACCAAGTCTAAAGCTTCTGAGTCAAATAGCAGGAAAAAGACTGCTTTCAGACATGGGGAGAAACAGGGGAGATCTTTCACCAAGCATGGTGTTAAAGGAAAGAGTGTATCTGATAAAGTTATATGCGAATACCTACATGAAGAAAATGACATTGAAGACAAACGAAAGTTGGATTTTGGTGGAAAAATTAATGCTGATGGCAGCAAAGTACCAGCCAGTGTGTATAATCTTGACATGGTACCTGGTGTTGGTTTGAGGAAGCAGCATCCATCACCACAAAATGCATGGGTGCGTTGTGATGATTGCCACAAGTGGCGGTGTATTCCAGCTTCACTTGCAGACCTAATTGAAGAAACAAACTGTGCCTGGACATGCAAAGACAGCGATGATAAAGCTTATGCTGATTGCTCTATCGCACAGGAAAAGTCAAACTCAGAGATCAATGCAGAGTTAGGATTATCAGATGCATCTGACGAAGATGATAATGAAGATTGCAAAAACTATAAGGAGCTAGAACATCGACGTCCAATGTTTTCTCAGGAATCAACTTTTACTCATATTTCTGCCAATGAGTTTCTCCATCGTAGCCACAAAACTCACACTATAGATGAGATAATGATTTGCCATTGCAAACCACCTCCAAAAGGTCAGTTGGGATGTGGAGATGAATGTTTAAATCGGATGCTTAACATTGAATGTGTTCAAGGGGCCTGCTCATGTGGGGACCTCTGTTCAAATCAGCAGTTCCAGAAACGCAATTATGCCAAACTGAAGTGGTTTAAATGTGGGAAAAAGGGCTATGGGCTGAAGGCGATTGAGGGCATATCTGAAGGGCAATTCCTTGTTGAGTATGTTGGCGAGGTGCTTGATATGCATGCCTATGAGGCACAACAAAGAGAATATGCTTTGAAGGGTCATAGACATTTCTACTTCATGGCCTTGAATGGCAGTGAGGTGATTGATGCAAGTAAAAAAGGAAATCTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTCGTACAGAAAAGTGGATGGTGAATGGAGAAATCTGTATTGGACTGTTTGCATTGAGAGATATTAAGCAGGATGAAGAGGTTACATTTGACTACAACTATGTCAGGGTTTTTGGTGCTGCTGCAAAAAAATGTTATTGTGGTTCACCTCATTGTCGAGGTTATATAGGTGGTGATCCACTCAATGCTGAAATCGTTGTTCAAGATGATTCAGATGAGGAATTTCCAGAACCTGTGATGCTTACTGAAGGTGATAATATTGAAGATGGGCTAGGTGGTTGCCTGGAGAATTCTCTAAACCCTGCCTCTGCTAGCTCTCAGCTGCACAGCTCGATAGAAGTGGACAATTCAAAGGGCAATTTATCATCTTCCATTCAAGTGAAAGTACCTTCCCAGCAAATGGAGGATGTAACTAGCAAACCTATGCCTGTTTTGCAACAAGGATATGCAGTAGAACTAGAGCATTCTGACAAATCTTTGATTGCAAATATGGAGACTTCTTCCTCTTCATTTTTTAGCAAATCCAAGTATGAAGTAATTGAAGACAAACGTGGTCTTTTAGAATCTCATCTGCTTGTGAAGGCTTCCCAAATAGCTGGCTCTATTAAGAAGGGGAAGGCATGTGCTAACCCTTCAAATAATCTCAAAGTTGGGGTGACCAAAAGATTGCAGGTTCCATCCATCCAACATAAAAAAGCAGTGGAAGGTTCTTCCAATGGTCGTTTTGAAGCAGTTGAGGAGAAGCTTAAAGAGTTGCTAGATGCAAATGGAGGAATTGGTAAAAGTAAAGATGCCACCAAAGGCTACTTGAAGCTTCTACTTCTTACTGTGGCATCAGGTGATAGGAGTAATGGTGAAGCCATTCAAAGCAACCGAGACCTTTCCATGATTCTTGGTGCCCTTTTGGAAACTAGATCAAGATCAGTGCTGAATGATATAGTTAATAAAAATGGTTTACGCATGCTACACAACATAATGAAGCAATACAGGTGGGACTTTAAAAAAATTCCAATTCTGCGAAAGCTTCTTAAGGTCTTAGAGCGCCTAGCAGAAAGAAATATTTTGACATCTGAGCATGTTAATGGTGGTCCCCCTTGCTGTGGAATGGAAAGCTTTAGGGAGTCAATGCTGTCCTTAACGGAACATGAAGACAAAGAGGTCCATCAAATTGCTCGAAGCTTTCGAGACAGATGGATTCCCAGATCTGTCAGAAAACGTGGCTTTATAAACAGGGATGACTGGGGGGTGAAATCTTATAGGAGTTTCAGACACAACAGATTTTCAGCATCACTGAACTATACATGTGAACAGAGTTTTAGACCTACTGAAGCAATAGATTGTGCCCAGCTGCCATTGGTTGAAACAAGTTCAGTCAATGCTGTTGCCCAGGAGGGCTGCACTGCACCATCTCTGAATGGGTGTGAAATCAGCAGGCCAATGAGACGTAAACGTAAAAGCCGATGGGATCAACCTGCGGAGACAAATTCAGTTGTAGTATCTTCTGAGCACAAGAAAGGAGAAGTTGTCTCTGGGCAGCCAAAGCAAGCTGACGTGATTATTAACGCTGTTGATGTTGAGCAGAATATTTCTAAAGATGTTCCACCTGGGTTTTCATGTTCAGTTCGGCCTTTGGGTTCTTTGAACGCCTCACGAAACTCTTGTGATCTTCCCTTGCAACAGGCAGGCCATTCTGGTTCTGGATGTTCCTCTGATGCAGTTATAGGTTGTCCAAGGGAAAAATTTAATCCTTGCTTGCCTGTCTCGTATGGAGTTCCATGGCCTGTTATCCAACAATATGGAACACCTCACGCAGACATCGAAGGCAGTTGGATCACTGCTCCAGGCATGCCTTTCTATCCGTTCCCTCCACTGCCCCCATATCGACGCCAGAGTGATTGTCAATCTTCCAAGTCTACTGATGCTATGAAAATAGATCAGCCTGCAGAAATTGTGAAGCGATTCTAG 5331 0.414 MGLCERMAMVDEAAGESVIMQHCSEFSLQSVPVERSCSKVGCSVLDSNIELSNILDGCKYFSANEESGSACCVDVTDMPSNARASKYENADMLLVKKTSDNDCHNCCSTFCGQCEVSNLESGSLCSEEKTHNHDDYQLPSEFKSVNGLLKDMKSSTILSTGDTIVAAEEKNNDVGLLTDAGNYIFDFIHSEFSMESEPITGCLVNFDEKSEQEDILRNTDPLEVVDNCNTLCGVKETSCRQISPAQGSEVPSEALYTDALCGMEVVVCNQTSSKDNLPETSTYRTFSSESGLPSFVSLNDNPSKDVPDLLLKDNSCDISYNSNACNSGQNDNGGKQIFRIDRVTGSKCSDIVLLPHRRNSQRNKSVCKQQTGRAPKKCNKQANVPQQEWGVKTISKATRKKRSCFSRAARSSKWGLLGNIKQAVGMDRELNINKVIFEGLRKDRGNYQSGKTNKDSANSSILNSMPGASTTRMRLKIKVGKGFNLYYPNFLVPQAVDGLASISNLGPSSSCQNLVSDTGDKLFDEVVVGKFESDKNNLYKHAVVLNGQVANNKLESAALMEKSDANAEEPCLLAPSKKLVDALVEPVNIERMDPGTGSSPDSEVIDSIPDFQVGERHQKYLNNTDFGSSTEFNFAVHDTASKGRKKKDKVACSCNSSVRDVSPGFPRKNKAKYSKNLESKKSCTDVVSSVELPSSIDMHTLSISSFVGYGEVHTKPLHLYGDIGLRDPTDALEVKSRVEVKTQCCLDINNENSDSPDTEKFLPSERHLGCKIPKSLKSNNVSQTKSKASESNSRKKTAFRHGEKQGRSFTKHGVKGKSVSDKVICEYLHEENDIEDKRKLDFGGKINADGSKVPASVYNLDMVPGVGLRKQHPSPQNAWVRCDDCHKWRCIPASLADLIEETNCAWTCKDSDDKAYADCSIAQEKSNSEINAELGLSDASDEDDNEDCKNYKELEHRRPMFSQESTFTHISANEFLHRSHKTHTIDEIMICHCKPPPKGQLGCGDECLNRMLNIECVQGACSCGDLCSNQQFQKRNYAKLKWFKCGKKGYGLKAIEGISEGQFLVEYVGEVLDMHAYEAQQREYALKGHRHFYFMALNGSEVIDASKKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQDEEVTFDYNYVRVFGAAAKKCYCGSPHCRGYIGGDPLNAEIVVQDDSDEEFPEPVMLTEGDNIEDGLGGCLENSLNPASASSQLHSSIEVDNSKGNLSSSIQVKVPSQQMEDVTSKPMPVLQQGYAVELEHSDKSLIANMETSSSSFFSKSKYEVIEDKRGLLESHLLVKASQIAGSIKKGKACANPSNNLKVGVTKRLQVPSIQHKKAVEGSSNGRFEAVEEKLKELLDANGGIGKSKDATKGYLKLLLLTVASGDRSNGEAIQSNRDLSMILGALLETRSRSVLNDIVNKNGLRMLHNIMKQYRWDFKKIPILRKLLKVLERLAERNILTSEHVNGGPPCCGMESFRESMLSLTEHEDKEVHQIARSFRDRWIPRSVRKRGFINRDDWGVKSYRSFRHNRFSASLNYTCEQSFRPTEAIDCAQLPLVETSSVNAVAQEGCTAPSLNGCEISRPMRRKRKSRWDQPAETNSVVVSSEHKKGEVVSGQPKQADVIINAVDVEQNISKDVPPGFSCSVRPLGSLNASRNSCDLPLQQAGHSGSGCSSDAVIGCPREKFNPCLPVSYGVPWPVIQQYGTPHADIEGSWITAPGMPFYPFPPLPPYRRQSDCQSSKSTDAMKIDQPAEIVKRF 1776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0427 1776 Gene3D SET domain 947 1179 IPR046341 -
Prci15g0427 1776 SMART PostSET_3 1163 1179 IPR003616 -
Prci15g0427 1776 Pfam AWS domain 1000 1035 IPR006560 GO:0005634|GO:0042054
Prci15g0427 1776 SMART shorttest3 986 1037 IPR006560 GO:0005634|GO:0042054
Prci15g0427 1776 FunFam Histone-lysine N-methyltransferase 871 932 - -
Prci15g0427 1776 ProSiteProfiles Zinc finger CW-type profile. 873 927 IPR011124 GO:0008270
Prci15g0427 1776 MobiDBLite consensus disorder prediction 772 814 - -
Prci15g0427 1776 MobiDBLite consensus disorder prediction 1604 1632 - -
Prci15g0427 1776 Gene3D - 869 932 - -
Prci15g0427 1776 CDD SET_SETD2 1037 1179 IPR044437 GO:0010452|GO:0046975
Prci15g0427 1776 ProSiteProfiles AWS domain profile. 986 1036 IPR006560 GO:0005634|GO:0042054
Prci15g0427 1776 FunFam Histone-lysine N-methyltransferase 936 1193 - -
Prci15g0427 1776 ProSiteProfiles SET domain profile. 1038 1155 IPR001214 GO:0005515
Prci15g0427 1776 PANTHER SET DOMAIN PROTEINS 386 1616 - -
Prci15g0427 1776 Pfam CW-type Zinc Finger 879 925 IPR011124 GO:0008270
Prci15g0427 1776 MobiDBLite consensus disorder prediction 789 814 - -
Prci15g0427 1776 MobiDBLite consensus disorder prediction 360 385 - -
Prci15g0427 1776 ProSiteProfiles Post-SET domain profile. 1163 1179 IPR003616 -
Prci15g0427 1776 SMART set_7 1038 1161 IPR001214 GO:0005515
Prci15g0427 1776 SUPERFAMILY SET domain 965 1176 IPR046341 -
Prci15g0427 1776 Pfam SET domain 1049 1155 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0427 Prci-Chr15 2781643 2797392 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0427 1021 1178 C2H2 Transcription Factor Family AT2G23740 33.714 1.11e-19 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci15g0427 SET 4.8e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0427 - - pcin:129294371 3585.04