Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0425 ATGAAAATACTACAAATGGGAGAGGCCCGAGATGTCCACGACGGAAGCTCCGGTGGCCGGACGGTGGTGGTAGCAATGAAGTTGGACTCGGCCAGCAAGGAGCTGCTCACATGGGCTTTGGTCAAAGTCGCTCAGCCTGGTGATGTTGTGGTGGCTCTTAATGTTCTTGGCAACAATCAAATCGTCGATCGAGATGGGAAATTGTCCCTTCTTTCGCTTGTCAACGCATTCGACTCTGTTCTTGCTGTTTATGAAGGTTTCTGCAATTTAAAACAGGTGGATCTCAAGCTCAAAGTTTGCAGAGGTCCATTAGTCCGTAAAATATTAGTCCGGGAAGCAAATGCTTATTCTGCAACTCATCTTATAGTAGGAATAGCCCATACCCTCCATACAATTCGGCCGACCACCTCCGTAGCTAAGTACTGTGCCAGAAAGTTATCCAGGAACTGCTGTGTTCTGGCTGTTAATAATGGGAAAGTAGTGTTCAAGAGTAATGGCTCCCCAGCAACTCCTTCTCACTTTAAAGGAATTGATCGTCGGAGCAAAATTGGTTTGCTTGAAACCATTCACCGGACATTCAATAAGAGTTCTAAAGTACTAAATGACGACACTACAGAAAATAAGCATGGTAAATCTTTTCTGGGGTCTAAAGAATCTTTGATTAAGAAACCAAGCTGCCCAATAAGTGGCTCAATTTCAGCACTGCCAAGCATATCCTGCCACCATTCTGCTTCAGGTGATGCTTTGGATGTAGTGCCTGTACATACAACTGAAGCAGCATCAAGAACAGCAACCACCTTGTCTGACAGAGAACTACCTGAGCTGAAACCTGGTTGGCCATTGTTACAACGGACAGTTTTATCAGATAGAGAGTCCCATGATATATCGTCGATGCGCCAGATATCTGTGGTCCAGTGGGCAATGCAGCTGCCTTGTAGGAATCTTTCATATGACACAACAGATCATGATCATAAACAAACTATAGCCTTAGATGGCAGAAGCGGTGCTATTGTTCCAGTTGATGTTGTAATAAGGACTGATTCTTCTTCACCAGGCCGCAATTCAAAAAGCATTCCTAAAGAATTAGAGGATCTACACGAGAAATACTCATCCATGTGCAGATTGTTTCAATATCAAGAACTTGTACGGGCAACTTCAAATTTCTCGCGAGAAAATTTGATTGGAAAAGGAGGAAGTAGTCAGGTGTATAGAGGTTGCCTTCCTGATGGCAAGGAGCTTGCCGTTAAGATTTTAAAGCCTTCTGATGATGTTTTGAAAGAGTTTCTATTGGAAATAGAAATTGTCACTACCTTGCACCATAAAAACATTATTTCCCTCTTGGGTTTCTGCTTTGAGGATGGCAATCTTCTTATGGTCTATGATTTTTTGTCTAGAGGAAGCCTTGAAGACAATCTTTATGGGAATAAGAAAAATCCACTCGTTTTTGGCTGGACCGAGAGATATAAGGTGGCAGTGGGTGTTGCTGAGGCTCTGGATTATCTGCATAACAATGGTGCTCAATCTGTGATCCACAGAGATGTGAAGTCATCAAATGTATTATTATCTGAGGACTTTGAGCCCCAGCTCTCTGATTTTGGTCTTGCTAAATGGGCGTCAACATCATCTTCACATATAACCTGCACAGTCGTTGCTGGAACTTTTGGTTACTTGGCTCCAGAGTACTTCATGTATGGCAAAGTCAATGCTAAGATTGATGTCTACGCATTCGGTGTTGTCGTCCTTGAGCTTCTTTCTGGAAGAAAACCCATAGGTGGAGATTACCCTAAAGGTCAAGAGAGCCTCGTTATGTGGGCAAGTCCAATTCTTAATAATGGAAAGGTGTCACAGCTGTTAGATCCAGGTTTGGGCGATAACTATGATAATGAGCGGATAGAGAGGATGGTGTTGGCAGCCAAACTTTGTATAAGACGTGATCCAAGAGCTAGGCCTCCTATGAGCCTTATTTCGAAGCTTCTTCAAGGGCATGCTGATGGGGTCAAATGGGCAAGATTAGAAGCTAATGCTTTGGAGAAACCAGGCATGCTCAACGATGAAGCTTGCGCGCCTTCTAATCTGCAGTCGCATCTCAATACTGCACTGCTTGACGTGGACGATGACTCAATCTCGATGGGCAGTGTTGAGCAGAATGTGTCCTTGGAAGACTACTTAAGAGGTCGATGGAGCCGCTCATCCAGCTTTGACTGA 2205 0.4395 MKILQMGEARDVHDGSSGGRTVVVAMKLDSASKELLTWALVKVAQPGDVVVALNVLGNNQIVDRDGKLSLLSLVNAFDSVLAVYEGFCNLKQVDLKLKVCRGPLVRKILVREANAYSATHLIVGIAHTLHTIRPTTSVAKYCARKLSRNCCVLAVNNGKVVFKSNGSPATPSHFKGIDRRSKIGLLETIHRTFNKSSKVLNDDTTENKHGKSFLGSKESLIKKPSCPISGSISALPSISCHHSASGDALDVVPVHTTEAASRTATTLSDRELPELKPGWPLLQRTVLSDRESHDISSMRQISVVQWAMQLPCRNLSYDTTDHDHKQTIALDGRSGAIVPVDVVIRTDSSSPGRNSKSIPKELEDLHEKYSSMCRLFQYQELVRATSNFSRENLIGKGGSSQVYRGCLPDGKELAVKILKPSDDVLKEFLLEIEIVTTLHHKNIISLLGFCFEDGNLLMVYDFLSRGSLEDNLYGNKKNPLVFGWTERYKVAVGVAEALDYLHNNGAQSVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSSSHITCTVVAGTFGYLAPEYFMYGKVNAKIDVYAFGVVVLELLSGRKPIGGDYPKGQESLVMWASPILNNGKVSQLLDPGLGDNYDNERIERMVLAAKLCIRRDPRARPPMSLISKLLQGHADGVKWARLEANALEKPGMLNDEACAPSNLQSHLNTALLDVDDDSISMGSVEQNVSLEDYLRGRWSRSSSFD 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0425 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 509 521 IPR008271 GO:0004672|GO:0006468
Prci15g0425 734 SMART serkin_6 388 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0425 734 ProSiteProfiles Protein kinase domain profile. 388 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0425 734 Gene3D Transferase(Phosphotransferase) domain 1 463 674 - -
Prci15g0425 734 SUPERFAMILY Protein kinase-like (PK-like) 369 659 IPR011009 -
Prci15g0425 734 ProSitePatterns Protein kinases ATP-binding region signature. 394 416 IPR017441 GO:0005524
Prci15g0425 734 Pfam Universal stress protein family 20 149 IPR006016 -
Prci15g0425 734 Gene3D Phosphorylase Kinase; domain 1 352 462 - -
Prci15g0425 734 FunFam Putative receptor-like serine/threonine-protein kinase 463 675 - -
Prci15g0425 734 CDD USP_Like 21 155 - -
Prci15g0425 734 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 357 462 - -
Prci15g0425 734 PANTHER OS08G0249100 PROTEIN 201 670 IPR046958 -
Prci15g0425 734 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 19 156 - -
Prci15g0425 734 Pfam Protein kinase domain 389 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0425 Prci-Chr15 2767922 2772023 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0425 375 655 Trihelix Transcription Factor Family AT1G68690 44.755 5.92e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci15g0425 Pkinase 8.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0425 - - pcin:129303222 1007.67