Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0395 ATGGGGAGCCCTCCTTCAACCTCATATGTCATCCTTGCATGCGATGCCACCAAAGATAGCAGTGAGCATGAGATCAAGTCCATTCTTGATCACGTACGAAGTACCCATGGCATTCTACAAGCAGGTTACAGATTGCTCGTGCTCGGCGTCTTGCATAAGGTGCCACACCCCATGGGGTATCAGACACTACCATGCCCCGAGTCTTTTGCTGGCACAAACTTTCGTGCAATGGATGAAGCAGTTGGCAAGAAACTTTATTCATATGCAAATATGCTTGCGCCGATTTATGAAGATTGGGAAAATGCAGGCGTATTGAACTTTAATATCAGCATTGAAGTCAAAGTTACAGCGGGTTTTCCAATCAGACAGGTTATAATGCAAGAGGTTGCATGCTATAATGCAGTTTGGATTGTACTCGATAGGCACCTTCGACGGGACTCAAGATTTCTTAACAGGATACCATGCAAGGTTGCATTGATTAAGGATGACTTATTTGTGGATATCTGGAGATCTCATCAATCACTTGAAACAGATGTCACAGAAAACAAGCTTGCTTATTCTTTGTCTAAATTTGTTTCTCTATCGGATTGTCAAAGTATTGCAGACATTGGGCATTCTATCTCCTCTTTCAAAAGCTGTCCCTTATCCATGGTTTTTTCTGACAACACAGACACATTTAGGAACAGTACAAAGCACTCATTTGCATCACATGAACATCTCTTCCCATCAGATCCTGGGTCGTCTTCTAAATCAGGTCTAAGCATCAAGGGAGAATATAAACATCCCCTTACTTCTCAGATTTTCCAAAAGCAAAGCAAATATGGCTTTATACCAAGATCATCAGATGCACCAATTCTTTGTGCTGGTTGTGGGATGAGGACTGAATTGTATGCTAAGGAATCGATGGGGTTCAGCTATTCTGACATACTGATTGCAACAAATGATTTTTCAAAGGATAACTTACTGGGTGAAGGTGGTTATGGTCACGTATACAAGGGTATCCTTAGAGATGGACAGCAAATTGCTGCAAAGGTAAGAAAAGAAGAAAGCAGCCAGGGCTTTTCTGAATTTCATTCTGAGGTTTATGTCTTGAGTTTTGCTCGGCACAAGAATATAGTGATGCTGCTGGGTTACTGTTGCAAAGAAAGGCAAAATATTTTGGTATATGAATATATTTGCAACAAGTCACTTGACTGGCATTTATTTGACAAAGATGCTGAAGTTCTCAAGTGGCCCCAAAGATATGCTATTGCTATTGGAACTGCAAAAGGATTGCGCTTTCTCCATGAAGAATGCCGCGGGGGGCCCATTATTCATCGGGATATGCGGCCAAGCAATATACTTCTTACTCATGATTTTGTTCCCATGCTAGGTGACTTTGGGCTTGCCAAATGGAAGACTGGTGGCGATGAGACTATGCAAACAAGGATAATGGGCACATCAGGATACCTTGCTCCTGAGTATGCTGAAGAGGGCGTTGTTTCTGTGGGGACAGATGTGTATGCTTATGGTGTTGTTCTGTTACAACTAATATCAGGACGCAAGGTGGGCATGTCCAGTAATCCTGAACAACCATCTCTCAGACAATGGGCCGAGATATTGATTGAGAAGTTGGCTTTACCAGAACTCATTGACCCACGACTTGGGGAGTCATATGACACGTATGAACTACACCTTATGGCAAAAGCAGCATACTTCTGTGTGCAAAGAAAGCCTGAGATGCGACCATCAATGGCAGAGGTTGTTCGCCTTCTTGAAGGAGAAAATAACCACTTCCATGCCCTGGCAGATCAGTTCGTGCCTAATTACCATCACTGA 1818 0.4285 MGSPPSTSYVILACDATKDSSEHEIKSILDHVRSTHGILQAGYRLLVLGVLHKVPHPMGYQTLPCPESFAGTNFRAMDEAVGKKLYSYANMLAPIYEDWENAGVLNFNISIEVKVTAGFPIRQVIMQEVACYNAVWIVLDRHLRRDSRFLNRIPCKVALIKDDLFVDIWRSHQSLETDVTENKLAYSLSKFVSLSDCQSIADIGHSISSFKSCPLSMVFSDNTDTFRNSTKHSFASHEHLFPSDPGSSSKSGLSIKGEYKHPLTSQIFQKQSKYGFIPRSSDAPILCAGCGMRTELYAKESMGFSYSDILIATNDFSKDNLLGEGGYGHVYKGILRDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKERQNILVYEYICNKSLDWHLFDKDAEVLKWPQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGGDETMQTRIMGTSGYLAPEYAEEGVVSVGTDVYAYGVVLLQLISGRKVGMSSNPEQPSLRQWAEILIEKLALPELIDPRLGESYDTYELHLMAKAAYFCVQRKPEMRPSMAEVVRLLEGENNHFHALADQFVPNYHH 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0395 605 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Prci15g0395 605 Pfam Protein kinase domain 317 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0395 605 PANTHER OS01G0750732 PROTEIN 239 591 - -
Prci15g0395 605 ProSitePatterns Tyrosine protein kinases specific active-site signature. 437 449 IPR008266 GO:0004672|GO:0006468
Prci15g0395 605 SUPERFAMILY Protein kinase-like (PK-like) 301 586 IPR011009 -
Prci15g0395 605 ProSiteProfiles Protein kinase domain profile. 316 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0395 605 Gene3D Transferase(Phosphotransferase) domain 1 393 599 - -
Prci15g0395 605 CDD STKc_IRAK 322 587 - -
Prci15g0395 605 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 288 391 - -
Prci15g0395 605 Gene3D Phosphorylase Kinase; domain 1 289 391 - -
Prci15g0395 605 FunFam Lectin-domain containing receptor kinase A4.3 392 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0395 Prci-Chr15 2552830 2558985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0395 276 586 Trihelix Transcription Factor Family AT5G38560 43.252 2.64e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Prci15g0395 Pkinase 2.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0395 - - vun:114163670 871.307