Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0393 ATGGGGAGCCCTCCTTCAACCTCATATGTCATCCTTGCATGCGATGCCACCAAAGATAGCAGTGAGCATGAGATCAAGTCCATTCTTGATCACGTACGAAGTACCCATGGCATTCTACAAGCAGGTTACAGATTGCTCGTGCTCGGCGTCTTGCATAAGGTGCCACACCCCATGGGGTATCAGACACTACCATGCCCCGAGTCTTTTGCTGGCACAAACTTTCGTGCAATGGATGAAGCAGTTGGCAAGAAACTTTATTCATATGCAAATATGCTTGCGCCGATTTATGAAGATTGGGAAAATGCAGGCGTATTGAACTTTAATATCAGCATTGAAGTCAAAGTTACAGCGGGTTTTCCAATCAGACAGGTTATAATGCAAGAGGTTGCATGCTATAATGCAGTTTGGATTGTACTCGATAGGCACCTTCGACGGGACTCAAGATTTCTTAACAGGATACCATGCAAGGTTGCATTGATTAAGGATGACTTATTTGTGGATATCTGGAGATCTCATCAATCACTTGAAACAGATGTCACAGAAAACAAGCTTGCTTATTCTTTGTCTAAATTTGTTTCTCTATCGGATTGTCAAAGTATTGCAGACATTGGGCATTCTATCTCCTCTTTCAAAAGCTGTCCCTTATCCATGGTTTTTTCTGACAACACAGACACATTTAGGAACAGTACAAAGCACTCATTTGCATCACATGAACATCTCTTCCCATCAGATCCTGGGTCGTCTTCTAAATCAGGTCTAAGCATCAAGGGAGAATATAAACATCCCCTTACTTCTCAGATTTTCCAAAAGCAAAGCAAATATGGCTTTATACCAAGATCATCAGATGCACCAATTCTTTGTGCTGGTTGTGGGATGAGGACTGAATTGTATGCTAAGGAATCGATGGGGTTCAGCTATTCTGACATACTGATTGCAACAAATGATTTTTCAAAGGATAACTTACTGGGTGAAGGTGGTTATGGTCACGTATACAAGGGTATCCTTAGAGATGGACAGCAAATTGCTGCAAAGGTAAGAAAAGAAGAAAGCAGCCAGGGCTTTTCTGAATTTCATTCTGAGGTTTATGTCTTGAGTTTTGCTCGGCACAAGAATATAGTGATGCTGCTGGGTTACTGTTGCAAAGAAAGGCAAAATATTTTGGTATATGAATATATTTGCAACAAGTCACTTGACTGGCATTTATTTGAATCTGAGAATCCAGGAAACAAATTTGCAGACAAAGATGCTGAAGTTCTCAAGTGGCCCCAAAGATATGCTATTGCTATTGGAACTGCAAAAGGATTGCGCTTTCTCCATGAAGAATGCCGCGGGGGGCCCATTATTCATCGGGATATGCGGCCAAGCAATATACTTCTTACTCATGATTTTGTTCCCATGCTAGGTGACTTTGGGCTTGCCAAATGGAAGACTGGTGGCGATGAGACTATGCAAACAAGGATAATGGGCACATCAGGATACCTTGCTCCTGAGTATGCTGAAGAGGGCGTTGTTTCTGTGGGGACAGATGTGTATGCTTATGGTGTTGTTCTGTTACAACTAATATCAGGACGCAAGGTGGGCATGTCCAGTAATCCTGAACAACCATCTCTCAGACAATGGGCCGAGATATTGATTGAGAAGTTGGCTTTACCAGAACTCATTGACCCACGACTTGGGGAGTCATATGACACGTATGAACTACACCTTATGGCAAAAGCAGCATACTTCTGTGTGCAAAGAAAGCCTGAGATGCGACCATCAATGGCAGAGGTTGTTCGCCTTCTTGAAGGAGAAAATAACCACTTCCATGCCCTGGCAGATCAGTTCGTGCCTAATTACCATCACTGA 1848 0.4275 MGSPPSTSYVILACDATKDSSEHEIKSILDHVRSTHGILQAGYRLLVLGVLHKVPHPMGYQTLPCPESFAGTNFRAMDEAVGKKLYSYANMLAPIYEDWENAGVLNFNISIEVKVTAGFPIRQVIMQEVACYNAVWIVLDRHLRRDSRFLNRIPCKVALIKDDLFVDIWRSHQSLETDVTENKLAYSLSKFVSLSDCQSIADIGHSISSFKSCPLSMVFSDNTDTFRNSTKHSFASHEHLFPSDPGSSSKSGLSIKGEYKHPLTSQIFQKQSKYGFIPRSSDAPILCAGCGMRTELYAKESMGFSYSDILIATNDFSKDNLLGEGGYGHVYKGILRDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKERQNILVYEYICNKSLDWHLFESENPGNKFADKDAEVLKWPQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGGDETMQTRIMGTSGYLAPEYAEEGVVSVGTDVYAYGVVLLQLISGRKVGMSSNPEQPSLRQWAEILIEKLALPELIDPRLGESYDTYELHLMAKAAYFCVQRKPEMRPSMAEVVRLLEGENNHFHALADQFVPNYHH 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0393 615 FunFam Lectin-domain containing receptor kinase A4.3 392 615 - -
Prci15g0393 615 Pfam Protein kinase domain 317 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0393 615 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Prci15g0393 615 PANTHER OS01G0750732 PROTEIN 241 601 - -
Prci15g0393 615 ProSitePatterns Tyrosine protein kinases specific active-site signature. 447 459 IPR008266 GO:0004672|GO:0006468
Prci15g0393 615 Gene3D Phosphorylase Kinase; domain 1 289 391 - -
Prci15g0393 615 Gene3D Transferase(Phosphotransferase) domain 1 393 609 - -
Prci15g0393 615 SUPERFAMILY Protein kinase-like (PK-like) 299 596 IPR011009 -
Prci15g0393 615 CDD STKc_IRAK 322 597 - -
Prci15g0393 615 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 288 391 - -
Prci15g0393 615 ProSiteProfiles Protein kinase domain profile. 316 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0393 Prci-Chr15 2552207 2558985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0393 276 596 Trihelix Transcription Factor Family AT5G38560 42.262 1.75e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Prci15g0393 Pkinase 4.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0393 - - vun:114163670 864.759