Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0380 ATGAGGAGCTATTTTTGGGGAAAATCGTTGGGAACCGAAGCTAAGCCGCGGCTGTCCTCCCAAAGTTTTGACCCCGATAAGCAGAGAAGCATGTACATGACAGATTCTTACTCCAGTCAGAGTTATGAGAAGTACTTCCATGATTTGCCAGCAGAAGAACTGATAGAACCATCTAGTTCTGGCGTCTTAAGCAATTCATTTCGCCAGGATGATGCTTCTCCATACCAGCCCAGAGCTAGTTCAGGAGCTTCTATGATCGCTAATAACCAATTTGATACTTCTTCCATTTCATTGGATGCCCTTGACTTTAACGGTCAAATGAGATTAAAACTGCGGGAATTAGAGAGGGCTCTGCTTGATGATGAGGAAGACATATTTGAGACTGCTCAAAGCATGGAAATTGACCCTGCGTGGGCTGATCCAATTAAGAATATGCAGCTTCATGACTCACCAAAGGAGTCTTCATCCTCAGATTCTAATCTTAGTAGCATCAGTAGCAACAAAGAAGTATCTCACATCTCTCCTCGGACCCCCAGGCAATTGCTTCTTGAATGTGCAGGTTTACTTTCAGAAGGAAACGCAGAGGTGGCATCGTCTATGATAAATAATTTGCGTCAGATGGTCTCAATTCAGGGAGATCCTCCCCAAAGAATTGCAGCCTATATGGTGGAAGGACTTGCAGCTCGCCTGGCTGAGTCTGGCAAGTGTATTTACAAAGCTCTGAAATGCAAGGAACCTCCTTCTTCAGATCGTCTGGCAGCAATGCAGATATTGTTTGAAGTGTGCCCATGCTTTAAATTTGGATTCATTGCTGCAAATGGTGCAATCACAGAGGCAGTGAAAGACGAAAGCGAGGTCCATATAGTTGATTTTGACATCAACCAGGGAAGCCAATACATAACTCTACTACAAACACTCGCTTCAAGGCCAGGCAAGCCTCCCCACGTGAGATTGACTGGAGTTGATGATCCAGAGTCTGTCCAGAGATCTGTTGGAGGCCTAAAGATCATAGGAGAAAGACTTGAGAAGCTGGCAGAAGTACTGGGGCTTCCGTTCGAGTTTCGAGCAGTGCCATCGAGGACATCCCTTGTCACCCCTTCAATGCTCAAATGTCGCCCTGGTGAAGCACTTATGGTGAACTTTGCGTTCCAGCTGCATCACATGCCCGATGAGAGCGTTTCCACAGTGAACGAGAGAGACCAACTCCTCCGCATGGTTAAGAGCCTTAATCCAAAACTCGTAACAGTTGTCGAACAGGATGTGAACACTAACACCACCCCTTTCTTCCCAAGATTCGTGGAAGCCTACAATTATTACTCTGCTGTTTTTGAGTCGCTTGATGCAACCCTTCCCAGGGAGAGTCGGGACAGGATGAATGTTGAGAGGCAATGCTTAGCGAGGGACATTGTCAACATTGTTGCATGCGACGGTGAGGATCGGATCGAAAGGTACGAAGTTGCTGGGAAATGGATAGCGAGGATGGCTATGGCAGGCTTCACTTCGTCCCCATTGAGCAGTCACGTGACTGACTCAATACGAAAACTCGTTAGGCAGTATTGTGAAAGGTACAAGATGAGGGAGGAAATGGGGGCACTTCATTTTGGGTGGGAAGACAAGAACTTGATAGTAGCTTCGGCGTGGAGGTGA 1647 0.4675 MRSYFWGKSLGTEAKPRLSSQSFDPDKQRSMYMTDSYSSQSYEKYFHDLPAEELIEPSSSGVLSNSFRQDDASPYQPRASSGASMIANNQFDTSSISLDALDFNGQMRLKLRELERALLDDEEDIFETAQSMEIDPAWADPIKNMQLHDSPKESSSSDSNLSSISSNKEVSHISPRTPRQLLLECAGLLSEGNAEVASSMINNLRQMVSIQGDPPQRIAAYMVEGLAARLAESGKCIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVKDESEVHIVDFDINQGSQYITLLQTLASRPGKPPHVRLTGVDDPESVQRSVGGLKIIGERLEKLAEVLGLPFEFRAVPSRTSLVTPSMLKCRPGEALMVNFAFQLHHMPDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTTPFFPRFVEAYNYYSAVFESLDATLPRESRDRMNVERQCLARDIVNIVACDGEDRIERYEVAGKWIARMAMAGFTSSPLSSHVTDSIRKLVRQYCERYKMREEMGALHFGWEDKNLIVASAWR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0380 548 MobiDBLite consensus disorder prediction 148 174 - -
Prci15g0380 548 MobiDBLite consensus disorder prediction 61 80 - -
Prci15g0380 548 Pfam GRAS domain family 179 548 IPR005202 -
Prci15g0380 548 Coils Coil 104 124 - -
Prci15g0380 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 155 543 IPR005202 -
Prci15g0380 548 ProSiteProfiles GRAS family profile. 169 548 IPR005202 -
Prci15g0380 548 MobiDBLite consensus disorder prediction 146 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0380 Prci-Chr15 2489534 2492098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0380 19 548 GRAS Transcription Factor Family AT1G21450 64.312 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci15g0380 GRAS 5.5e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0380 - - pcin:129294210 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0380 15 2489534 2492098 Prci15g0380 15 2489534 2492098 ECH