Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0376 ATGCCACATAGAAGTGAGGGCGTGCGTGGCGACGAAGATGATTCCACTATTGATGATCAATGCAGCACTTACTTCGATGTCTATGGCCCTCAAGGCAAGGCTGATGTTATTTTTAAAACAACTGAGGCTAATTCAACTTTGAATCTTCAGGACATTCAAGGACTGGTAACTTGGGTTCTTGCTGAAGGATTTATGCCGTCATGGGTTTTCATTAGGAACAAACCTCTTATTCAAAAAGTGGTTATGCTCTATACACCAGGCCTGGATGCAGCTTTGTACTTGTCACAGTCTAAAATGCTGCCCTTTTTAAAAAAATTCTGTGGCAATCCGAAGGCAGTCTTAGCTCTTAGCTGTGTTTCAGATGGAATGCAGACAATAGATGCACTCCTTACGTGCAAGCTGAAAAGAAAGAGGGATGAAAGTAGTTCAGTTACAGAGAAATCAACCCTGATATCTCTGCAAGAAAAAAGCAGTGGTGGTACAGATAATATATCGTTTATGGAGCTTACAGAAGGCATTCCTTTCCCTGTTACATACTATACACTTACTGAGAAGGAATTTGAAGACAATGGATATTCATTTAAACAGCCAGGTTTTCTTGCTACTTTGCCTGCTCCTTTGGGATCTTCTCCCTATGAAATGCTGGCGCTTGATTGTGAGATGTGCATCACAAGTGAGGGCTTTGAACTTACAAGAATTACTCTAGTGGATTTTAAAGGACAGGTCGTGCTTGATAAATTGGTTAAACCATCAAACGCTATCATTGATTACAATACCAGGTTTAGTGGTATAACACCTGAGATGTTAAATGGGGTCACAACAAATCTGAAAGACATTCAGGATGAATTTCTAAAGCTGGTTTACCAAGAGACTATTCTGGTTGGGCATTCTTTAGAAAATGATTTGTTAGCTCTGAAGATCTCTCATGATTTGGTAATTGACACGGCAGTATTATACAAACACTGCCGAGGGTCATCTCATAAAACTGCTCTGCGGATTCTTGCCAAGAAATTTCTCTCTCGGGAAATACAGCAATCAGGGAATGGACATGACAGCATTGAAGATGCTAGAGCTGCATTGGAATTGGCACTATTGAAGATCAGACATGGACCTGACTTTGGTTCTCCCCCATCCTTCATGCGGAAAAAGCTCTCTTCCATTTTGAGCGAGTCTAAAAAAACTTCCTCTTTAGTTGATAATATATCTACAGTAAAACGATATGCTTCTGAGTCGTCCAATGCGATTCCAGTGACTTCTGATGATGAAGCGCTTGCAAGGACCACCAAGGAGGTGAAAAATGACAAGGTACATTTTATCTGGACACAGTTTTCAGAATTACATTCATACTTGAAGAAGCAAGCTGAGGATTCAGAGATCTTGAATAAAAGACTTGCTGAGATGATGTCACTGCTTACTTGTAAGAAGAATTCTGCTAAAGGTAAAGACATCAAGCTGAGAGCAACTACTGAATTGAAGGAAATTCTAGGTCGCATGGATGCTAGAATTGAAACTCTATATAAGTCGTTACCGTCTAATGCTATGCTGATAATTTGCACCGGTCATGGAGACACAGCAATTGTGCACAGACTCAGGAGAATGCTTGCCGAGCAGGGCGAAACCACGATATGTCGTGAGAAGATTGTGGAAATCCTAGAAGAGGTTCAGGCTCGAGCGGAGGTAGCCTTGTGTTTTTTAGGTGTGAAGCATTGA 1710 0.4105 MPHRSEGVRGDEDDSTIDDQCSTYFDVYGPQGKADVIFKTTEANSTLNLQDIQGLVTWVLAEGFMPSWVFIRNKPLIQKVVMLYTPGLDAALYLSQSKMLPFLKKFCGNPKAVLALSCVSDGMQTIDALLTCKLKRKRDESSSVTEKSTLISLQEKSSGGTDNISFMELTEGIPFPVTYYTLTEKEFEDNGYSFKQPGFLATLPAPLGSSPYEMLALDCEMCITSEGFELTRITLVDFKGQVVLDKLVKPSNAIIDYNTRFSGITPEMLNGVTTNLKDIQDEFLKLVYQETILVGHSLENDLLALKISHDLVIDTAVLYKHCRGSSHKTALRILAKKFLSREIQQSGNGHDSIEDARAALELALLKIRHGPDFGSPPSFMRKKLSSILSESKKTSSLVDNISTVKRYASESSNAIPVTSDDEALARTTKEVKNDKVHFIWTQFSELHSYLKKQAEDSEILNKRLAEMMSLLTCKKNSAKGKDIKLRATTELKEILGRMDARIETLYKSLPSNAMLIICTGHGDTAIVHRLRRMLAEQGETTICREKIVEILEEVQARAEVALCFLGVKH 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0376 569 SMART exoiiiendus 213 372 IPR013520 -
Prci15g0376 569 Pfam Exonuclease 216 362 IPR013520 -
Prci15g0376 569 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 50 389 IPR047021 GO:0004527
Prci15g0376 569 CDD REX1_like 215 355 IPR034922 -
Prci15g0376 569 SUPERFAMILY Ribonuclease H-like 214 366 IPR012337 -
Prci15g0376 569 Gene3D - 211 372 IPR036397 GO:0003676
Prci15g0376 569 FunFam RNA exonuclease NEF-sp 210 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0376 Prci-Chr15 2482007 2488550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0376 214 362 C2H2 Transcription Factor Family AT3G27970 26.347 4.16e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0376 K14570 - qsa:O6P43_019835 880.937