Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0375 ATGCCACATAGAAGTGAGGGCGTGCGTGGCGACGAAGATGATTCCACTATTGATGATCAATGCAGCACTTACTTCGATGTCTATGGCCCTCAAGGCAAGGCTGATGTTATTTTTAAAACAACTGAGGCTAATTCAACTTTGAATCTTCAGCAGGACATTCAAGGACTGGTAACTTGGGTTCTTGCTGAAGGATTTATGCCGTCATGGGTTTTCATTAGGAACAAACCTCTTATTCAAAAAGTGGTTATGCTCTATACACCAGGCCTGGATGCAGCTTTGTACTTGTCACAGTCTAAAATGCTGCCCTTTTTAAAAAAATTCTGTGGCAATCCGAAGGCAGTCTTAGCTCTTAGCTGTGTTTCAGATGGAATGCAGACAATAGATGCACTCCTTACGTGCAAGCTGAAAAGAAAGAGGGATGAAAGTAGTTCAGTTACAGAGAAATCAACCCTGATATCTCTGCAAGAAAAAAGCAGTGGTGGTACAGATAATATATCGTTTATGGAGCTTACAGAAGGCATTCCTTTCCCTGTTACATACTATACACTTACTGAGAAGGAATTTGAAGACAATGGATATTCATTTAAACAGCCAGGTTTTCTTGCTACTTTGCCTGCTCCTTTGGGATCTTCTCCCTATGAAATGCTGGCGCTTGATTGTGAGATGTGCATCACAAGTGAGGGCTTTGAACTTACAAGAATTACTCTAGTGGATTTTAAAGGACAGGTCGTGCTTGATAAATTGGTTAAACCATCAAACGCTATCATTGATTACAATACCAGGTTTAGTGGTATAACACCTGAGATGTTAAATGGGGTCACAACAAATCTGAAAGACATTCAGGATGAATTTCTAAAGCTGGTTTACCAAGAGACTATTCTGGTTGGGCATTCTTTAGAAAATGATTTGTTAGCTCTGAAGATCTCTCATGATTTGGTAATTGACACGGCAGTATTATACAAACACTGCCGAGGGTCATCTCATAAAACTGCTCTGCGGATTCTTGCCAAGAAATTTCTCTCTCGGGAAATACAGCAATCAGGGAATGGACATGACAGCATTGAAGATGCTAGAGCTGCATTGGAATTGGCACTATTGAAGATCAGACATGGACCTGACTTTGGTTCTCCCCCATCCTTCATGCGGAAAAAGCTCTCTTCCATTTTGAGCGAGTCTAAAAAAACTTCCTCTTTAGTTGATAATATATCTACAGTAAAACGATATGCTTCTGAGTCGTCCAATGCGATTCCAGTGACTTCTGATGATGAAGCGCTTGCAAGGACCACCAAGGAGGTGAAAAATGACAAGGTACATTTTATCTGGACACAGTTTTCAGAATTACATTCATACTTGAAGAAGCAAGCTGAGGATTCAGAGATCTTGAATAAAAGACTTGCTGAGATGATGTCACTGCTTACTTGTAAGAAGAATTCTGCTAAAGGTAAAGACATCAAGCTGAGAGCAACTACTGAATTGAAGGAAATTCTAGGTCGCATGGATGCTAGAATTGAAACTCTATATAAGTCGTTACCGTCTAATGCTATGCTGATAATTTGCACCGGTCATGGAGACACAGCAATTGTGCACAGACTCAGGAGAATGCTTGCCGAGCAGGGCGAAACCACGATATGTCGTGAGAAGATTGTGGAAATCCTAGAAGAGGTTCAGGCTCGAGCGGAGGTAGCCTTGTGTTTTTTAGGTGTGAAGCATTGA 1713 0.411 MPHRSEGVRGDEDDSTIDDQCSTYFDVYGPQGKADVIFKTTEANSTLNLQQDIQGLVTWVLAEGFMPSWVFIRNKPLIQKVVMLYTPGLDAALYLSQSKMLPFLKKFCGNPKAVLALSCVSDGMQTIDALLTCKLKRKRDESSSVTEKSTLISLQEKSSGGTDNISFMELTEGIPFPVTYYTLTEKEFEDNGYSFKQPGFLATLPAPLGSSPYEMLALDCEMCITSEGFELTRITLVDFKGQVVLDKLVKPSNAIIDYNTRFSGITPEMLNGVTTNLKDIQDEFLKLVYQETILVGHSLENDLLALKISHDLVIDTAVLYKHCRGSSHKTALRILAKKFLSREIQQSGNGHDSIEDARAALELALLKIRHGPDFGSPPSFMRKKLSSILSESKKTSSLVDNISTVKRYASESSNAIPVTSDDEALARTTKEVKNDKVHFIWTQFSELHSYLKKQAEDSEILNKRLAEMMSLLTCKKNSAKGKDIKLRATTELKEILGRMDARIETLYKSLPSNAMLIICTGHGDTAIVHRLRRMLAEQGETTICREKIVEILEEVQARAEVALCFLGVKH 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0375 570 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 58 391 IPR047021 GO:0004527
Prci15g0375 570 SUPERFAMILY Ribonuclease H-like 215 367 IPR012337 -
Prci15g0375 570 FunFam RNA exonuclease NEF-sp 211 375 - -
Prci15g0375 570 CDD REX1_like 216 356 IPR034922 -
Prci15g0375 570 SMART exoiiiendus 214 373 IPR013520 -
Prci15g0375 570 Pfam Exonuclease 217 363 IPR013520 -
Prci15g0375 570 Gene3D - 212 373 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0375 Prci-Chr15 2482005 2488550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0375 215 363 C2H2 Transcription Factor Family AT3G27970 26.347 4.00e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0375 K14570 - qsa:O6P43_019835 876.315