Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0374 ATGCCACATAGAAGTGAGGGCGTGCGTGGCGACGAAGATGATTCCACTATTGATGATCAATGCAGCACTTACTTCGATGTCTATGGCCCTCAAGGCAAGGCTGATGTTATTTTTAAAACAACTGAGGCTAATTCAACTTTGAATCTTCAGCAGGACATTCAAGGACTGGTAACTTGGGTTCTTGCTGAAGGATTTATGCCGTCATGGGTTTTCATTAGGAACAAACCTCTTATTCAAAAAGTGGTTATGCTCTATACACCAGGCCTGGATGCAGCTTTGTACTTGTCACAGTCTAAAATGCTGCCCTTTTTAAAAAAATTCTGTGGCAATCCGAAGGCAGTCTTAGCTCTTAGCTGTGTTTCAGATGGAATGCAGACAATAGATGCACTCCTTACGTGCAAGCTGAAAAGAAAGAGGGATGAAAGTAGTTCAGTTACAGAGAAATCAACCCTGATATCTCTGCAAGAAAAAAGCAGTGGTGGTACAGATAATATATCGTTTATGGAGCTTACAGAAGGCATTCCTTTCCCTGTTACATACTATACACTTACTGAGAAGGAATTTGAAGACAATGGATATTCATTTAAACAGCCAGGTTTTCTTGCTACTTTGCCTGCTCCTTTGGGATCTTCTCCCTATGAAATGCTGGCGCTTGATTGTGAGATGTGCATCACAAGTGAGGGCTTTGAACTTACAAGAATTACTCTAGTGGATTTTAAAGGACAGGTCGTGCTTGATAAATTGGTTAAACCATCAAACGCTATCATTGATTACAATACCAGGTTTAGTGGTATAACACCTGAGATGTTAAATGGGGTCACAACAAATCTGAAAGACATTCAGGATGAATTTCTAAAGCTGGTTTACCAAGAGACTATTCTGGTTGGGCATTCTTTAGAAAATGATTTGTTAGCTCTGAAGATCTCTCATGATTTGGTAATTGACACGGCAGTATTATACAAACACTGCCGAGGGTCATCTCATAAAACTGCTCTGCGGATTCTTGCCAAGAAATTTCTCTCTCGGGAAATACAGCAATCAGGGAATGGACATGACAGCATTGAAGATGCTAGAGCTGCATTGGAATTGGCACTATTGAAGATCAGACATGGACCTGACTTTGGTTCTCCCCCATCCTTCATGCGGAAAAAGCTCTCTTCCATTTTGAGCGAGTCTAAAAAAACTTCCTCTTTAGTTGATAATATATCTACAGTAAAACGATATGCTTCTGAGTCGTCCAATGCGATTCCAGTGACTTCTGATGATGAAGCGCTTGCAAGGACCACCAAGGAGTTTTCAGAATTACATTCATACTTGAAGAAGCAAGCTGAGGATTCAGAGATCTTGAATAAAAGACTTGCTGAGATGATGTCACTGCTTACTTGTAAGAAGAATTCTGCTAAAGGTAAAGACATCAAGCTGAGAGCAACTACTGAATTGAAGGAAATTCTAGGTCGCATGGATGCTAGAATTGAAACTCTATATAAGTCGTTACCGTCTAATGCTATGCTGATAATTTGCACCGGTCATGGAGACACAGCAATTGTGCACAGACTCAGGAGAATGCTTGCCGAGCAGGGCGAAACCACGATATGTCGTGAGAAGATTGTGGAAATCCTAGAAGAGGTTCAGGCTCGAGCGGAGGTAGCCTTGTGTTTTTTAGGTGTGAAGCATTGA 1677 0.412 MPHRSEGVRGDEDDSTIDDQCSTYFDVYGPQGKADVIFKTTEANSTLNLQQDIQGLVTWVLAEGFMPSWVFIRNKPLIQKVVMLYTPGLDAALYLSQSKMLPFLKKFCGNPKAVLALSCVSDGMQTIDALLTCKLKRKRDESSSVTEKSTLISLQEKSSGGTDNISFMELTEGIPFPVTYYTLTEKEFEDNGYSFKQPGFLATLPAPLGSSPYEMLALDCEMCITSEGFELTRITLVDFKGQVVLDKLVKPSNAIIDYNTRFSGITPEMLNGVTTNLKDIQDEFLKLVYQETILVGHSLENDLLALKISHDLVIDTAVLYKHCRGSSHKTALRILAKKFLSREIQQSGNGHDSIEDARAALELALLKIRHGPDFGSPPSFMRKKLSSILSESKKTSSLVDNISTVKRYASESSNAIPVTSDDEALARTTKEFSELHSYLKKQAEDSEILNKRLAEMMSLLTCKKNSAKGKDIKLRATTELKEILGRMDARIETLYKSLPSNAMLIICTGHGDTAIVHRLRRMLAEQGETTICREKIVEILEEVQARAEVALCFLGVKH 558
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0374 558 SUPERFAMILY Ribonuclease H-like 215 367 IPR012337 -
Prci15g0374 558 Gene3D - 212 373 IPR036397 GO:0003676
Prci15g0374 558 FunFam RNA exonuclease NEF-sp 211 375 - -
Prci15g0374 558 CDD REX1_like 216 356 IPR034922 -
Prci15g0374 558 SMART exoiiiendus 214 373 IPR013520 -
Prci15g0374 558 Pfam Exonuclease 217 363 IPR013520 -
Prci15g0374 558 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 51 391 IPR047021 GO:0004527
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci15g0374 Prci-Chr15 2481992 2488550 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0374 215 363 C2H2 Transcription Factor Family AT3G27970 26.347 4.79e-06 47.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0374 K14570 - qsa:O6P43_019835 842.802