Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0371 ATGGTACCCCCGGGACCACCCACTCCGATTGGTGGTGCCCAGTCTGTGTCACCCTCCCTCCTGAGATCTAATTCTGGAATGTTGGGAGCTCAAGGGGGTCCGATGCCTTCACAGTCTTCTTTTCCCTCGCTTGTGTCACCGCGGACTCAGTTTAACAACATGAACATGCTAGGAAATATGTCCAATGTATCTTCCATGCTGAATCAGTCTTTTCCAAATGGGGTTCCAAATTCTGCACTCTCTGGTCCCGGAAGTAACCAGCGAGGAGGCGTTGATGCTGGAGCTAAAACAGATCCTCTTTCCAGTGTTGGCAATGGAATGAGCTTCAATACTACCTCATCCTCGTTTGTACAATCAAATATGGTGAATCCTGGTCCGTCTGGTCAAGGTCAGGGCCAACAATTTTCAAATCCTTCTAGTAACCAACTGTTGCCAGATCAACAGCATTCCCAACAAGACACTCAAAATTTCCAGCATAGTCAGCAGTCATTGCAACAGTTCTCGTCACCTCTGAACTCTCAGCAACAACAGCAGCAGCAACATTTTCAATCAATGCGAGGTGGGATACCTGGCATCGGACATGTTAAATTGGAGCCCCAAGTAAACAATGATCAACTTGGGCAGCAGCAGCAACAGCAGCAGCAGATGCAATCATTGAGGAATCTTGCACCGGTGAAATTGGAACCTCAACAAATGCAAACAATGAGAACTATGGCACCAGTAAAAATGGAACCACAGCATTCTGATCAGTCATTATTTTTGCATCAACAACAGCAACAGCAGCAGCAGCAGCAGCAATACCTCCACATGTCAAGACAACCCTCTCAGGCTACTGCTGCCCATCTCAATCTATTGCACCACCATAGACTGTTGCACTCACAACAGCACCCACAACAACAACTCTTAAAGGCAATGCCTCAGCAACGGCCACAACTACAACAGCAGTTTCAACAGCAGAATATGCCTATAAGGTCTCCCGTAAAGCCAGTTTATGAACCTGGAATGGGTGCTAGGCGGCTGACAAATTATATGTGTCACCAACAGCATAGACCTGGAGATAACAATATTGAGTTCTGGAGGAAATTTGTTGCTGAATATTTTGCTCCTAGCAAAAAGAAGTGGTGTGTTTCTATGTATGGAAGCGGCAGACATACAACTGGGGTTTTCCCTCAGGATGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGTTGAGGTACTTCCGAGGCTTTTCAAAATTAAGTATGAAAGTGGCACTTTGGAAGAGCTACTTTATGTAGACATGCCTCGCGAGTATCCTAATTCCTCTGGTCAGATTGTTCTGGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTCTTTTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGTCATGAGGAGCTTATCCCAAGAAGACTGTTAATACCTCAGGTTAGTCAGCTTGGAGCTGCTGCTCAAAAATACCAGTCTTTTACTCAGAATGCAACTCCTAATTTATCTGTTCCTGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCTCGTCAGCTTGCAAAAGCCCTAGAGGTGCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTGCAGATATCCGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAAAAGGGATTGGACCTATGGAAAGCTTGGCCAAATATCCTCGGAGAACTGGTAGTTCATCTGGAGTTAATGGTCAAGCTCAACTGCCTGAAGATCAATTACCACATCCACAGCAGCAGCAGCAGCAGCAAGTGGTGGCCCAAAACTCAAATGGTGATCAAAACTCGGTGCAGCCTGCTGCTGTGCAAATAACTTCTAGTAATGGCGTGGCTAGTGTAAATAACTGTATCCACTCAGTATCTGCATCGACTACTCCAAGCACCATTGTTGGACTTCTTCACCAGAACTCCATGAATTCTAGACAACAGAATTCCATGAATAATGCCAGCAGTCCATATGGAGGTAGTTCTGTTCAGATGCCATCCCCAGGTTCTTCCAGTACTGTGCCACCAGCACAGCCAAATCCGTCGCCCTTTCAAGCGCCAACACCATCCTCATCTAGCAATCCACCACAAACTTCTCACTCATCTTTAGCAGCCGGCAATCACATGAATCCATCTAATTCACCAGCTAATGTTTCCTTGCAACAGCAGCAGTCATCCCTTTCTGGTGAAGCTGACCCCAGTGATGCTCAGAGTTCAGTTCAAAAAATCTTATCTGGGATATACTCCCAAAATAATGGCACGGATGGAATGGTAGGTGTCGGTTCTTTTGGAAACGATGTCAAGAATGTGAATGGGATTATGTCTGTGAGTACCAATACAGGTCTCAATGGTGGAAACTGCCTGGCTGGCAATGGGCCTGTGAATGGCAATTCATGTGCTGGAGCTGGTGGCTATGGCACAATGTGCGTTGGACATGGTCAATCTGTCATGGTCAGTGGGATCAGGGCTGCAATGGGAAACAACTCTATTATCAATGATAGGGGAGTAATGGCAGCCATTGCTCGAGACCAAGCTATGAATCACCAGCAAGATTTGTCAAACGAACTACTTAGTGGACTAGGAGCAGTAAATAGTTTTAATAATCTTCAATTTGATTGGAAATCTTCCTCATGA 2745 0.4506 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPSQSSFPSLVSPRTQFNNMNMLGNMSNVSSMLNQSFPNGVPNSALSGPGSNQRGGVDAGAKTDPLSSVGNGMSFNTTSSSFVQSNMVNPGPSGQGQGQQFSNPSSNQLLPDQQHSQQDTQNFQHSQQSLQQFSSPLNSQQQQQQQHFQSMRGGIPGIGHVKLEPQVNNDQLGQQQQQQQQMQSLRNLAPVKLEPQQMQTMRTMAPVKMEPQHSDQSLFLHQQQQQQQQQQQYLHMSRQPSQATAAHLNLLHHHRLLHSQQHPQQQLLKAMPQQRPQLQQQFQQQNMPIRSPVKPVYEPGMGARRLTNYMCHQQHRPGDNNIEFWRKFVAEYFAPNXKKKWCVSMYGSGRHTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYPNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQSFTQNATPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSREKGIGPMESLAKYPRRTGSSSGVNGQAQLPEDQLPHPQQQQQQQVVAQNSNGDQNSVQPAAVQITSSNGVASVNNCIHSVSASTTPSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQMPSPGSSSTVPPAQPNPSPFQAPTPSSSSNPPQTSHSSLAAGNHMNPSNSPANVSLQQQQSSLSGEADPSDAQSSVQKILSGIYSQNNGTDGMVGVGSFGNDVKNVNGIMSVSTNTGLNGGNCLAGNGPVNGNSCAGAGGYGTMCVGHGQSVMVSGIRAAMGNNSIINDRGVMAAIARDQAMNHQQDLSNELLSGLGAVNSFNNLQFDWKSSS 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0371 915 Pfam LIM-domain binding protein 339 593 IPR029005 -
Prci15g0371 915 PANTHER LIM DOMAIN-BINDING PROTEIN 225 904 IPR029005 -
Prci15g0371 915 MobiDBLite consensus disorder prediction 674 777 - -
Prci15g0371 915 MobiDBLite consensus disorder prediction 101 185 - -
Prci15g0371 915 MobiDBLite consensus disorder prediction 729 777 - -
Prci15g0371 915 MobiDBLite consensus disorder prediction 710 728 - -
Prci15g0371 915 MobiDBLite consensus disorder prediction 597 646 - -
Prci15g0371 915 MobiDBLite consensus disorder prediction 674 709 - -
Prci15g0371 915 MobiDBLite consensus disorder prediction 12 85 - -
Prci15g0371 915 MobiDBLite consensus disorder prediction 590 646 - -
Prci15g0371 915 MobiDBLite consensus disorder prediction 1 216 - -
Prci15g0371 915 MobiDBLite consensus disorder prediction 201 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0371 Prci-Chr15 2472120 2480034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0371 1 913 C2H2 Transcription Factor Family AT1G43850 58.830 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0371 - - gmx:100799771 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0371 15 2472120 2480034 Prci15g0371 15 2472120 2480034 ECH