Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0363 ATGTCTAGCACGGCGGGTCAGATTATCAAGTGCAAAGCTGCGGTGGCTTGGGAAGCAGGGAAGCCACTGGTGATTGAAGAGATAGATGTGGCGCCTCCTCAGGCTGGAGAAGTGCGTCTGAAAATCCTCTTTACCTCTCTCTGCCATACTGACGTTTACTTCTGGGAAGCGAAGGGTCAAACTCCTGTATTCCCTCGTATATTAGGTCACGAAGCTGGAGGGATCGTGGAGAGCATAGGGGAGGGAGTGACTCATCTGAAACCAGGAGATCATGCTCTCCCAGTATTCACAGGGGAATGCGGGGAGTGCCCGCACTGTAAGTCGGAAGAAAGCAACATGTGTGACCTTCTCAGGATCAACACGGACAGGGGTGTTATGATCGGTGACGGCAAATCCAGATTCTCCAAGAACGGACAGCCAATATATCATTTTGTGGGAACCTCCACATTCAGCGAGTACACTGTTGTGCATGCTGGTTGTGTTGCTAAGATTGACCCTGCTGCTCCACTTGACAAAGTTTGTATTCTCAGTTGCGGGATCTGCACAGGTCTTGGTGCTACTGTAAATGTTGCAAAACCAAAACCTGGTTCCTCTGTTGCCGTTGGGCTTGGAGCTGTCGGACTGCTGTATGCTGCTGAAGGGGCAAGGATTTCTGGTGCATCAAGAATTATTGGGGTTGATTTAGTTTCTAGCCGTTTTGAGCTAGCCAAGAAGTTTGGAGTTAATGAATTTGTGAACCCAAAAGATCATGACAAGCCCGTTCAGGAGGTGATAGCTGAAATGACTAACGGGGGAGTGGATCGTGCTGTCGAATGCACTGGGAGCATCCAGGCCATGATCTCAGCATTCGAATGTGTCCACGATGGTTGGGGTGTTGCGGTACTGGTTGGAGTGCCAAACAAGGATGACGCGTTTAAAACTCATCCGATGAATTTCTTGAACGAGAGGACTCTGAAGGGTACCTTCTATGGCAACTACAAGCCACGTTCTGATCTGCCTTCTGTCGTAGAGAAGTACATGAAAGGGTAAGGGCTGGAACTTGAGAAGTTCATCACTCATTCGGTCCCTTTCTCAGAGATCAATAAAGCCTTTGACTATATGCTCAAAGGGGAATCCATCAGGTGCATCATTCGCATGCAAGACTAG 1146 0.4887 MSSTAGQIIKCKAAVAWEAGKPLVIEEIDVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPVFPRILGHEAGGIVESIGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMIGDGKSRFSKNGQPIYHFVGTSTFSEYTVVHAGCVAKIDPAAPLDKVCILSCGICTGLGATVNVAKPKPGSSVAVXGLGAVGLLYAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKDHDKPVQEVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNFLNERTLKGTFYGNYKPRSDLPSVVEKYMKGXGLELEKFITHSVPFSEINKAFDYMLKGESIRCIIRMQD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0363 382 PANTHER ALCOHOL DEHYDROGENASE 6 378 - -
Prci15g0363 382 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Prci15g0363 382 Gene3D - 19 372 - -
Prci15g0363 382 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Prci15g0363 382 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Prci15g0363 382 Pfam Zinc-binding dehydrogenase 210 333 IPR013149 -
Prci15g0363 382 SUPERFAMILY GroES-like 329 379 IPR011032 -
Prci15g0363 382 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 343 IPR036291 -
Prci15g0363 382 FunFam Alcohol dehydrogenase class-P 183 322 - -
Prci15g0363 382 Gene3D - 183 322 - -
Prci15g0363 382 SUPERFAMILY GroES-like 4 187 IPR011032 -
Prci15g0363 382 CDD alcohol_DH_plants 9 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0363 Prci-Chr15 2402219 2404946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0363 1 382 Monolignol Biosynthesis Gene Families AT1G72680 24.416 1.18e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0363 K18857 - gmx:100783858 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0363 15 2402219 2404946 Prci15g0363 15 2402219 2404946 ECH