Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0342 ATGGGAAACAGACCAGAATGGTTGTTCATGTTCTCAACAGCCTTCACGATCGGAGCAGTGTTCTTTCGTGCTAGAGCCGAGCCCGTGGAAGATAAACAAGCGTTGCTTGACTTCCTCCACAACATAAACCACTCGCTTGCTCTGAGGTGGGATGAAAACTCTTCTGTATGCAATAGCTGGAGAGGAATCACCTGCAATAGAGACCATTCCAGAGTCATAGCCCTTTATTTATCTGCAGTTGGATTGAGCGGTCCAATCCCAACGAACACCCTAAGTCGCCTCTCAGCACTTGAGACCGTAAATCTAACATCCAATAGCATAACGGGTCCTTTTCCTTCTGGCTTCTCTGAGCTCAAGAATTTAACCTATCTTTACATTCAATTCAACGACTTTTCTGGCCCATTGCCATCAGATTTCTCGGTCTGGAAGAATTTGGCAGTTGCTGATTTATCCAACAATTTTTTTAATGGGAGCATTCCTCCATCAATTTCGAATTTGATTCATCTCACATCTCTAGTCCTGGCAAATAACTCTCTTTCGGGTGAAATTCCTGATATCAATATTCCTACCCTTCTAGAGCTGAATCTGGCCAACAATAACCTCAGTGGGATGGTGCCCAAATCCCTTCTGAGATTCCCAAGTAGGGCGTTTTCTGGGAACAATCTTACATTGGCAAATGCTCGACCAAGAAAGAAAACCTCAAAAAGATTTGGTAAGTCTGCATTATTAGGTGTCATTCTAGGTGGCAGCGGGCTAGCATTTGCATTGATTGCAGCTTTCTTGCTTTTGTGCTACTGCGATGGAGGAGGTGAAAATGGGCTAGCACTTAAATCCCAGAAAAAAGACAGGTTTCTGAAGAAGGATATCTCTCAGAGTCATTGCAGAAAAAACAAGATTGAGTTCTTTGAGGATTGCAATTTTGCGTTTGACCTGGAGGATCTGCTGAGAGCATCTGCTGAGGTGCTTGGTAAGGGGACCTATGGTACAACATATAAGGCAAATATAGAGGACTCTGCTGTTGTGGTGGTGAAGAGATTGAAGGAAGTCATAATCGGAAAACGTGAGTTTGAGCAGCAGATGGAGGTTGTGGGGAGGATTAGGCACGACAATGTGGCTGCTCTAAGGGCATATTACTATTCCAAGGAGGAGAAACTCATGATCTATGATTACTATGAACAAAGTAGCGTTTCTGCTATGTTGCATGGTAAAAGAGGGGAAGAAAGGATTTCTTTGGATTGGAATAGCAGGCTGGGGATTGCAATAGGTGCAGCAAGAGGCCTTGCTCACGTCCATGCCCAACAAGGAGGAAGACTTGTCCATGGAAACATAAAAGCCTCGAACATCTTCCTCAACTCGGACGGATATGGTTGTATATCGGATATTGGTTTGGCAACACTGATGGGCACAATAATGCCACCGTCTCTAAGAAGTGCTGGGTACCGTGCTCCAGAAGTAACAGACCTCAGAAAAGCCAGCCACGCATCTGATGTCTACAGTTTTGGGGTGTTGCTGTTGGAGCTTCTGACTGGAAAGTGCCCCATGCATGCCACAGGAAGTGAAGAGGCCATCCACCTGGTTAGATGGGTGAATTCTGTGGTCAGAGAGGAATGGACAGCAGAGGTATTTGATGCACAGTTGCTGAGATTTCCAAGTACAGAGGAAAAGATGGTACAAATGTTGCAACTTGCGATGGCATGTGTTGCAAGGGTACCAGAGCAGCGGCCAAAAATGCCAGATGTTTTGAGAATGATGGAGGAAATTCGACGGCCAGGTTCTGAGAATCAGCTTTGGTCTGAATCTAGATCAGCAGCTTCTACCCCAACACCACAAGCAACTGACGTACCTTCTTTCTCTGTAGATGCTTAG 1866 0.4528 MGNRPEWLFMFSTAFTIGAVFFRARAEPVEDKQALLDFLHNINHSLALRWDENSSVCNSWRGITCNRDHSRVIALYLSAVGLSGPIPTNTLSRLSALETVNLTSNSITGPFPSGFSELKNLTYLYIQFNDFSGPLPSDFSVWKNLAVADLSNNFFNGSIPPSISNLIHLTSLVLANNSLSGEIPDINIPTLLELNLANNNLSGMVPKSLLRFPSRAFSGNNLTLANARPRKKTSKRFGKSALLGVILGGSGLAFALIAAFLLLCYCDGGGENGLALKSQKKDRFLKKDISQSHCRKNKIEFFEDCNFAFDLEDLLRASAEVLGKGTYGTTYKANIEDSAVVVVKRLKEVIIGKREFEQQMEVVGRIRHDNVAALRAYYYSKEEKLMIYDYYEQSSVSAMLHGKRGEERISLDWNSRLGIAIGAARGLAHVHAQQGGRLVHGNIKASNIFLNSDGYGCISDIGLATLMGTIMPPSLRSAGYRAPEVTDLRKASHASDVYSFGVLLLELLTGKCPMHATGSEEAIHLVRWVNSVVREEWTAEVFDAQLLRFPSTEEKMVQMLQLAMACVARVPEQRPKMPDVLRMMEEIRRPGSENQLWSESRSAASTPTPQATDVPSFSVDA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0342 621 Gene3D Ribonuclease Inhibitor 29 229 IPR032675 -
Prci15g0342 621 Gene3D Phosphorylase Kinase; domain 1 282 390 - -
Prci15g0342 621 Pfam Leucine rich repeat 86 131 IPR001611 GO:0005515
Prci15g0342 621 MobiDBLite consensus disorder prediction 593 621 - -
Prci15g0342 621 ProSitePatterns Protein kinases ATP-binding region signature. 322 353 IPR017441 GO:0005524
Prci15g0342 621 FunFam Probable inactive receptor kinase RLK902 28 187 - -
Prci15g0342 621 Gene3D Transferase(Phosphotransferase) domain 1 392 605 - -
Prci15g0342 621 FunFam pollen receptor-like kinase 1 286 390 - -
Prci15g0342 621 SUPERFAMILY Protein kinase-like (PK-like) 320 585 IPR011009 -
Prci15g0342 621 ProSiteProfiles Protein kinase domain profile. 316 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0342 621 SUPERFAMILY L domain-like 41 212 - -
Prci15g0342 621 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Prci15g0342 621 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 391 598 - -
Prci15g0342 621 Pfam Protein kinase domain 319 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0342 621 PANTHER OS05G0588300 PROTEIN 14 599 - -
Prci15g0342 621 MobiDBLite consensus disorder prediction 591 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0342 Prci-Chr15 2258077 2261171 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0342 20 609 Receptor kinase-like Gene Family AT4G23740 52.894 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Prci15g0342 Pkinase 9.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0342 - - aprc:113851984 844.728