Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0323 ATGAATATTCAGCAGGAGAAGTCAGTCAGGTTTCAGGATTGGAATTGGAACGGTGAGAACCAATATTCCATTGCAAGTAGCACAAGCCACCCAGGGAGAATCTCATCTTCTCTAAAGTCAGTTTCTATGAAATTTCAAAGAGGCTTCAAATCTGGTTCTGAGAGAATTAAGAGATTTATAAATTCATTCAAATCTTTTCCTTATAATAGTGTGGTCGCTAGAAGTTTTAGTTCTAGAAATAAAATCCTTGATCCACAGGGCTCATTCCTTCAAAAGTGGAACAAGATATTTGTATTATCATGTCTTATTGCTGTGTCACTAGATCCTTTGTTCTTTTATGTCCCTGTTGTTGATGGTGAGAAGAAATGCCTTTCACTGGACCACAAGATGGAGATAACAGCTACTGTTCTAAGATCTTTCTGTGATATTTTTTATATAATCCACATAATTTTCCAATTTCGTACTGGATTTATTGCTCCCTCTTCTCGAGTGTTTGGAAGAGGTGTTTTGGTTGAAGATGCATGGGCCATAGCGAAGAGGTATCTGTCCTCATACTTTTTCATTGACATTCTTGCTGTTCTTCCCTTCCCACAGGTGGTGATTTTGATTGTCATTCCAAGGTTAACAGGAGGCTTTAAATCGCTGAACACAAAGAACTTTCTAAAATTTGTTGTTTTCTTCCAATATGTACCAAGGCTTTTACGTGTTGTTCCTTTATATAAAGAAATCACAAGGACCTCTGGCATTCTCACTGAAACTGCTTGGGCTGGAGCAGCATTCAATCTTTTTCTTTACATGCTTGTGAGTCATGTTTTTGGTGCCTTTTGGTACTTGTTTTCTATAGAACGAGAAACCACTTACTGGCAACGAGCCTGCCGTAGAAATGCTACATGTCACAAGTCAGCTCTGTATTGTGGTTCTCCAGGGTCAAGGGACATTGTAAACTACTTGAACGATTCTTGCCCGATACAAGAGGCAAATACTACACTTTTTAATTTTGGAATATTCCTTGATGCACTTCAGTCTGGTATAGTGGAGTCAGGAGATTTCCCACAGAAGTTTCTTTACTGTTTTTGGTGGGGGCTTAGAAATTTGAGTTCTCTTGGTCAGAACCTGGCAACAAGTACTTATGTTTGGGAGATCATCTTTGCTGTTTTCATCTCCATCTCTGGTTTGGTATTATTTTCATTTCTTATCGGAAATATGCAGACATATCTGCAGTCAACAACTACAAGATTGGAGGAGATGAGAGTCAAAAGAAGAGATGCAGAACAATGGATGTCTCATCGGTTGCTCCCTGATAGTCTGAGAGAGCGAATCAGACGATATGAACAATACAAATGGCAAGAAACCAGAGGTGTTGATGAGGAAAACTTGATCCGTAGTCTTCCTAAGGATTTACGAAGGGACATTAAGCGTCATCTTTGCTTGGCTCTGCTGACGAGAGTGCCAATGTTTGAGAAAATGGATGAACAACTGTTGGATGCAATGGGTGACCGTCTGAAGCCAGTGCTCTACACAGAAGAAAGCTGCATCGTTCGGGAAGGAGATCCGGTGGACGAGATGCTCTTCATAATGCGAGGCAAACTACTGACGGTGACAACCAATGGCGGAAGAACAGGCTTCTTTAACTCAGAGTTCCTCAAGGGCGGCGACTTCTGCGGGGAGGAGCTTCTGACGTGGGCATTAGATCCCCATTCCTCATCCAATCTTCCCATCTCAACCAGGACCGTACGGACCCTCGTAGAAGTTGAAGCCTTTTCTCTCAAAGCCGACGACTTGAAGGTCGTGGCGTCTCAGTTCAGGCGTCTTCACAGTAAGCAGCTTCGTCACACTTTCAGGTTCTACTCGCAACAATGGCGGACATGGGCCGCGTGTTTCATACAGGCAGCGTGGCGGCGATATAGTAAGAAGAAGCTTGAAGAGTCTCTGAGGGAAGAAGAGAACAGGCTGCAAGATGCGTTGGCAACGGCAAGTGGTAACTCACCTAGCCTTGGTGCTACAATATATGCTTCCAGATTTGCTGCCAATGCGCTTCGAGCCTTACGACGGAATCGGTCCAGGAAAACACGGTTGGCCGAAAGATTTCCGCCCATGTTGCTCCAGAAGCCTGCAGAGCCCGATTTTACTGCAGACGAGATTGAGCAATGA 2151 0.4342 MNIQQEKSVRFQDWNWNGENQYSIASSTSHPGRISSSLKSVSMKFQRGFKSGSERIKRFINSFKSFPYNSVVARSFSSRNKILDPQGSFLQKWNKIFVLSCLIAVSLDPLFFYVPVVDGEKKCLSLDHKMEITATVLRSFCDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDAWAIAKRYLSSYFFIDILAVLPFPQVVILIVIPRLTGGFKSLNTKNFLKFVVFFQYVPRLLRVVPLYKEITRTSGILTETAWAGAAFNLFLYMLVSHVFGAFWYLFSIERETTYWQRACRRNATCHKSALYCGSPGSRDIVNYLNDSCPIQEANTTLFNFGIFLDALQSGIVESGDFPQKFLYCFWWGLRNLSSLGQNLATSTYVWEIIFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEENLIRSLPKDLRRDIKRHLCLALLTRVPMFEKMDEQLLDAMGDRLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEFLKGGDFCGEELLTWALDPHSSSNLPISTRTVRTLVEVEAFSLKADDLKVVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALATASGNSPSLGATIYASRFAANALRALRRNRSRKTRLAERFPPMLLQKPAEPDFTADEIEQ 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0323 716 Pfam Cyclic nucleotide-binding domain 506 597 IPR000595 -
Prci15g0323 716 SUPERFAMILY cAMP-binding domain-like 414 607 IPR018490 -
Prci15g0323 716 Coils Coil 637 657 - -
Prci15g0323 716 Gene3D Jelly Rolls 483 603 IPR014710 -
Prci15g0323 716 Gene3D - 95 409 - -
Prci15g0323 716 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 71 709 - -
Prci15g0323 716 ProSiteProfiles cAMP/cGMP binding motif profile. 485 569 IPR000595 -
Prci15g0323 716 SUPERFAMILY Voltage-gated potassium channels 84 407 - -
Prci15g0323 716 FunFam Cyclic nucleotide-gated ion channel 1 412 476 - -
Prci15g0323 716 Gene3D Helix hairpin bin 411 476 - -
Prci15g0323 716 CDD CAP_ED 485 616 IPR000595 -
Prci15g0323 716 Pfam Ion transport protein 93 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci15g0323 716 FunFam Cyclic nucleotide-gated ion channel 1 483 601 - -
Prci15g0323 716 SMART cnmp_10 485 616 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0323 Prci-Chr15 2083297 2090646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0323 1 713 Ion Channels AT5G53130 76.912 0.0 1109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0323 K05391 - gmx:100815774 1157.51