Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0322 ATGAATATTCAGCAGGAGAAGTCAGTCAGGTTTCAGGATTGGAATTGGAACGGTGAGAACCAATATTCCATTGCAAGTAGCACAAGCCACCCAGGGAGAATCTCATCTTCTCTAAAGTCAGTTTCTATGAAATTTCAAAGAGGCTTCAAATCTGGTTCTGAGAGAATTAAGAGATTTATAAATTCATTCAAATCTTTTCCTTATAATAGTGTGGTCGCTAGAAGTTTTAGTTCTAGAAATAAAATCCTTGATCCACAGGGCTCATTCCTTCAAAAGTGGAACAAGATATTTGTATTATCATGTCTTATTGCTGTGTCACTAGATCCTTTGTTCTTTTATGTCCCTGTTGTTGATGGTGAGAAGAAATGCCTTTCACTGGACCACAAGATGGAGATAACAGCTACTGTTCTAAGATCTTTCTGTGATATTTTTTATATAATCCACATAATTTTCCAATTTCGTACTGGATTTATTGCTCCCTCTTCTCGAGTGTTTGGAAGAGGTGTTTTGGTTGAAGATGCATGGGCCATAGCGAAGAGGTATCTGTCCTCATACTTTTTCATTGACATTCTTGCTGTTCTTCCCTTCCCACAGGTGGTGATTTTGATTGTCATTCCAAGGTTAACAGGAGGCTTTAAATCGCTGAACACAAAGAACTTTCTAAAATTTGTTGTTTTCTTCCAATATGTACCAAGGCTTTTACGTGTTGTTCCTTTATATAAAGAAATCACAAGGACCTCTGGCATTCTCACTGAAACTGCTTGGGCTGGAGCAGCATTCAATCTTTTTCTTTACATGCTTGTGAGTCATGTTTTTGGTGCCTTTTGGTACTTGTTTTCTATAGAACGAGAAACCACTTACTGGCAACGAGCCTGCCGTAGAAATGCTACATGTCACAAGTCAGCTCTGTATTGTGGTTCTCCAGGGTCAAGGGACATTGTAAACTACTTGAACGATTCTTGCCCGATACAAGAGGCAAATACTACACTTTTTAATTTTGGAATATTCCTTGATGCACTTCAGTCTGGTATAGTGGAGTCAGGAGATTTCCCACAGAAGTTTCTTTACTGTTTTTGGTGGGGGCTTAGAAATTTGAGTTCTCTTGGTCAGAACCTGGCAACAAGTACTTATGTTTGGGAGATCATCTTTGCTGTTTTCATCTCCATCTCTGGTTTGGTATTATTTTCATTTCTTATCGGAAATATGCAGACATATCTGCAGTCAACAACTACAAGATTGGAGGAGATGAGAGTCAAAAGAAGAGATGCAGAACAATGGATGTCTCATCGGTTGCTCCCTGATAGTCTGAGAGAGCGAATCAGACGATATGAACAATACAAATGGCAAGAAACCAGAGGTGTTGATGAGGAAAACTTGATCCGTAGTCTTCCTAAGGATTTACGAAGGGACATTAAGCGTCATCTTTGCTTGGCTCTGCTGACGAGATTTTTTTGCTGCAAAGTTAGGAATCCTGCTTTGCAGGTGGTGAATCAGAATCAGACGCTTAAAAAGAAGAGTGCAAGATTACTGGACTGGAGCCAAAAGATGAAATCTGTGTATTACAGTCTCGGGCTGACATTTGGTGGGTTTTGTTTTATATTGAAGGTGCCAATGTTTGAGAAAATGGATGAACAACTGTTGGATGCAATGGGTGACCGTCTGAAGCCAGTGCTCTACACAGAAGAAAGCTGCATCGTTCGGGAAGGAGATCCGGTGGACGAGATGCTCTTCATAATGCGAGGCAAACTACTGACGGTGACAACCAATGGCGGAAGAACAGGCTTCTTTAACTCAGAGTTCCTCAAGGGCGGCGACTTCTGCGGGGAGGAGCTTCTGACGTGGGCATTAGATCCCCATTCCTCATCCAATCTTCCCATCTCAACCAGGACCGTACGGACCCTCGTAGAAGTTGAAGCCTTTTCTCTCAAAGCCGACGACTTGAAGGTCGTGGCGTCTCAGTTCAGGCGTCTTCACAGTAAGCAGCTTCGTCACACTTTCAGGTTCTACTCGCAACAATGGCGGACATGGGCCGCGTGTTTCATACAGGCAGCGTGGCGGCGATATAGTAAGAAGAAGCTTGAAGAGTCTCTGAGGGAAGAAGAGAACAGGCTGCAAGATGCGTTGGCAACGGCAAGTGGTAACTCACCTAGCCTTGGTGCTACAATATATGCTTCCAGATTTGCTGCCAATGCGCTTCGAGCCTTACGACGGAATCGGTCCAGGAAAACACGGTTGGCCGAAAGATTTCCGCCCATGTTGCTCCAGAAGCCTGCAGAGCCCGATTTTACTGCAGACGAGATTGAGCAATGA 2310 0.4316 MNIQQEKSVRFQDWNWNGENQYSIASSTSHPGRISSSLKSVSMKFQRGFKSGSERIKRFINSFKSFPYNSVVARSFSSRNKILDPQGSFLQKWNKIFVLSCLIAVSLDPLFFYVPVVDGEKKCLSLDHKMEITATVLRSFCDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDAWAIAKRYLSSYFFIDILAVLPFPQVVILIVIPRLTGGFKSLNTKNFLKFVVFFQYVPRLLRVVPLYKEITRTSGILTETAWAGAAFNLFLYMLVSHVFGAFWYLFSIERETTYWQRACRRNATCHKSALYCGSPGSRDIVNYLNDSCPIQEANTTLFNFGIFLDALQSGIVESGDFPQKFLYCFWWGLRNLSSLGQNLATSTYVWEIIFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDSLRERIRRYEQYKWQETRGVDEENLIRSLPKDLRRDIKRHLCLALLTRFFCCKVRNPALQVVNQNQTLKKKSARLLDWSQKMKSVYYSLGLTFGGFCFILKVPMFEKMDEQLLDAMGDRLKPVLYTEESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEFLKGGDFCGEELLTWALDPHSSSNLPISTRTVRTLVEVEAFSLKADDLKVVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALATASGNSPSLGATIYASRFAANALRALRRNRSRKTRLAERFPPMLLQKPAEPDFTADEIEQ 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0322 769 SMART cnmp_10 538 669 IPR000595 -
Prci15g0322 769 SUPERFAMILY cAMP-binding domain-like 414 487 IPR018490 -
Prci15g0322 769 Gene3D - 96 409 - -
Prci15g0322 769 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 71 762 - -
Prci15g0322 769 Gene3D Jelly Rolls 536 656 IPR014710 -
Prci15g0322 769 Gene3D Helix hairpin bin 411 476 - -
Prci15g0322 769 ProSiteProfiles cAMP/cGMP binding motif profile. 538 622 IPR000595 -
Prci15g0322 769 Pfam Ion transport protein 93 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci15g0322 769 FunFam Cyclic nucleotide-gated ion channel 1 412 476 - -
Prci15g0322 769 FunFam Cyclic nucleotide-gated ion channel 1 536 654 - -
Prci15g0322 769 Pfam Cyclic nucleotide-binding domain 559 650 IPR000595 -
Prci15g0322 769 SUPERFAMILY Voltage-gated potassium channels 84 407 - -
Prci15g0322 769 Coils Coil 690 710 - -
Prci15g0322 769 CDD CAP_ED 538 669 IPR000595 -
Prci15g0322 769 SUPERFAMILY cAMP-binding domain-like 532 656 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0322 Prci-Chr15 2083297 2090648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0322 1 766 Ion Channels AT5G53130 71.632 0.0 1085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0322 K05391 - gmx:100815774 1132.86