Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0318 ATGGTTCCATCCTCCATGTGGAAACAATGGGAAGGCAAAGTATTGTTCCATTACTCTCCAGGATTTTGGGTGTTGTGGATCTTTATCATCCCCCTTGCCTTGCAAACATGTACTGCGAAGCACCATCAACATTGCGCTCCTTCTTCCTATGGCAAACTCCCCAACATAAGCTACCCATTTCGATTAAAGCAAGACCCGGGCAAGTGTGGCGAGCGCGAATATGAGTTGGATTGTGTCAACAACGTTGCCGTCTTACGTTTGAATTATGCGGAGTACACTGTAGAGGCGATCAACTACAACAATTACACCATCAGACTGGTCGATCCTGGCATTCAAGAGGCTAATTGCTCCTCCATGCCTCGCTGTCTTTTGTTTAATTCCAATTTCAGTGGTTTCTCCTCATCCCAAGGCGAGGAATTTCATTCAGACAATGAACAAGTGGATCCTTATCAACCCGCCCAAGCGAGAAATTACGACGGCTGGGCCTTGATCTTCCGCGATCTATTGCAGCCTATAATTTACCTGAGGTGTGCGGATCCTGTGAGGGACGATGCTTCGTATGTAGATACCGCATCATGCCTTGACGATTCCAATACGTACGCTGTTGTTGGGAACATAGACCTTGCAAGTTGGAGGCCTGGTTGTCGTGTGAAGGCAGTCTCTCCTACTTCCTCGACATGGTCTTCCGTTGCGGACGGCGGTAGTGCTCATCTTAATGTTTCATACAAGGATATTCATAGGCAACTATCCTTCGGATTCGAGCTTTCCTGGATGCATTTTGTTTGTCGTTCTCAATGTGGTTCCAAACCTTGCTACTTCAACTACACCGTCGGAGGCACCCAGTGCCACTTTGAGCACTCACTGCTATTACATCAATGGAGGGGCCCACTCCTGAGGAATTTTCACAAGGATTGCCATTTACACGAAAATTCCTCTTTTTCTAGAACTATGAATGATATATCTATTGACAGTTGTGAAATTTTCTTGGCAGCTTCTCTTTCCGGCACTGTAACTGGATTGGCGTGGTTAATTACATTTCGGCACATACATCTTGACAATGCAAATGCATTTAATAGAGCAATTGCGGTTGGATATTATGGCCTACCATCATTTTTAGCAGCTAGATTTTTGTTTGGGGCTACGCTTCTGATTGCCATATTGATTCATAAATGGAGGAGGAGACATCTTTCGGTTTATGAAAATATTGAGAACTTCCTGCAAGATAAAGAACTTGTGCCTATAAGATACTCCTACAAAGAAATCAAGAAGATGACAAATAATTTCAAGATCAAATTGGGTCAAGGGGGCTTCGGTTCTGTACACAAGGGGAATCTGCGTAGTGGGCCTTACGTAGCCATAAAAATGTTGGGTGCGACCAAAACTAATTGGCAAGAGTTTATCAATGAAGTAGCAACTATTGGAAGAATTCATCACGTGAATGTGGTTCGGCTCATTGGGTATTGTGTTGATGGGTCAAAACGTGCTCTTGTTTATGAATTTATGTCCAATAGCTCTCTGGACAAACATAGTTTCTTAAAGGCAGGAGGCATCACTCTAAACTATGAGAAAATATATGAAATATCTCTTGCAGTAGCCAATGGAATAATGTATCTTCATCAAGGTTGTGATATGCAAATTTTACATTTTGATATCAAACCTCATATTCTTCTTGATGAAAACTTCACTCCTAAAGTTTCAGATTTTGGACTTGCAAAGCTTTATCCTGTGAATGATAGTATGGTTACCTTAACTACTGCAAGAGGAACACTAGGTTACATGGCTCCAGAATTGTTTTATGAGAATATTGGAAGAGTTTCTTATAAATCTGATGTTTACAGTTTTGGCATGCTTTTAATGGAAATGGCAAGTAAGAGGAAGAATTCTAACCCCAATGCAGAGCACTCAAGCCAAGCTTACTTCCCCTTTTGGATTTATGATCAATTTAGCGAGGAGAGAGATAGAATGGAAGATGCCACAGAGGAGGAAAAGAAGCTGGCAAAGAAGATGTTTATAACTGCACTGTGGTGTATCCAATTGAAGACTCAGGATCGGCCTTCAATGAGCGAGGTGATAAAGATGCTGGAAGGGAAATTAGAAAGTTTAGAGATACCACCGAGGCCTTCCTTTTATCCTGATGAAATTGCTGGCAAAGATGTTGGAGTCAGCACTAGCACAACACTTACAAGTAGCTTTAGTTGTGACACCAGTGACCTTACACCACTGTGTAACTGA 2232 0.422 MVPSSMWKQWEGKVLFHYSPGFWVLWIFIIPLALQTCTAKHHQHCAPSSYGKLPNISYPFRLKQDPGKCGEREYELDCVNNVAVLRLNYAEYTVEAINYNNYTIRLVDPGIQEANCSSMPRCLLFNSNFSGFSSSQGEEFHSDNEQVDPYQPAQARNYDGWALIFRDLLQPIIYLRCADPVRDDASYVDTASCLDDSNTYAVVGNIDLASWRPGCRVKAVSPTSSTWSSVADGGSAHLNVSYKDIHRQLSFGFELSWMHFVCRSQCGSKPCYFNYTVGGTQCHFEHSLLLHQWRGPLLRNFHKDCHLHENSSFSRTMNDISIDSCEIFLAASLSGTVTGLAWLITFRHIHLDNANAFNRAIAVGYYGLPSFLAARFLFGATLLIAILIHKWRRRHLSVYENIENFLQDKELVPIRYSYKEIKKMTNNFKIKLGQGGFGSVHKGNLRSGPYVAIKMLGATKTNWQEFINEVATIGRIHHVNVVRLIGYCVDGSKRALVYEFMSNSSLDKHSFLKAGGITLNYEKIYEISLAVANGIMYLHQGCDMQILHFDIKPHILLDENFTPKVSDFGLAKLYPVNDSMVTLTTARGTLGYMAPELFYENIGRVSYKSDVYSFGMLLMEMASKRKNSNPNAEHSSQAYFPFWIYDQFSEERDIXMEDATEEEKKLAKKMFITALWCIQLKTQDRPSMSEVIKMLEGKLESLEIPPRPSFYPDEIAGKDVGVSTSTTLTSSFSCDTSDLTPLCN 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0318 744 Gene3D Phosphorylase Kinase; domain 1 403 500 - -
Prci15g0318 744 FunFam serine/threonine-protein kinase PBS1-like 396 500 - -
Prci15g0318 744 PANTHER RUST RESISTANCE KINASE LR10-RELATED 399 713 IPR045874 GO:0004672
Prci15g0318 744 Pfam Protein tyrosine and serine/threonine kinase 429 695 IPR001245 GO:0004672|GO:0006468
Prci15g0318 744 Gene3D Transferase(Phosphotransferase) domain 1 501 704 - -
Prci15g0318 744 ProSiteProfiles Protein kinase domain profile. 426 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0318 744 SUPERFAMILY Protein kinase-like (PK-like) 412 696 IPR011009 -
Prci15g0318 744 Pfam Wall-associated receptor kinase galacturonan-binding 45 108 IPR025287 GO:0030247
Prci15g0318 744 ProSitePatterns Protein kinases ATP-binding region signature. 432 454 IPR017441 GO:0005524
Prci15g0318 744 FunFam PR5-like receptor kinase 501 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0318 Prci-Chr15 2079400 2082333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0318 364 711 Receptor kinase-like Gene Family AT5G38260 45.833 7.85e-95 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci15g0318 PK_Tyr_Ser-Thr 3.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0318 - - pcin:129294475 1508.04