Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0317 ATGATAGTGGCAAATCAAAAGAGTAAATTGGCAAACCGAAAGTCAGTACTCAGTAGTCCTCCACTCCACAACATGAACATTCGCTTCCTCCTCCTCTTCTACATTCTTCCTCCAGCAAGCATAGAAACATGCTCAGACGCCGTTTGTCAGGACGATAACCTGACAGTCCGATTCCCGTTTCGAATCCAACAGAGTCAGCAGCAGCCAAAGTCGTGTGGTTATCCAGGTTTTGATGTATCTTGCAGTAACCAAGGCCAAACACAGCTGAAACTCCCATCCTCTGGGGGAGAATTCAATATCCGAGGAATAGATTATGCAGCACAAGAACTATGGATCAATGATCCCGAGAACTGCCTCCCAAAACGCATTCTCTCCCTCAATCTCACTGGATCTCCATTTAGCGGCGTTTATTATCAAGATTTCTCATTCTTCAACTGTTCCTCGGAGTATCTCAAGTATCGGTATACCCCAATAGCTTGCCTTAGCAATTCCAACTATACTGTTTTTGCCACGTCTTCCAGATCGGTTTTCAGGCACTTGTTGGCAGTTTGTAGTTTCATTGCCACCGTTAGGGTTCCGGTTCAGCAGCCGTTTTACGAGCACGTATCGTCGTCAGACCTGAGCGATGACCTCCGGCTGTCGTGGGATTCGCCGCCGTGTGGGAAGTGCGAGTCCCGTGGTGGGCGGTGTGGGTTCCAGATCAATTCCACTGCTGACATTGCTTGCTCCTACTTTCCTTCCCAAGGGATTTCAAAGGGAGCACGTTATGCCATAGGCATAGGCATTGGAGTGCCGGCTATGTTGGGCCTCATCGGGATGCTGTATTACGTCGGCGAGAGGTGTAGAAGGGTCGAGACATATGTTGGGCCGGAACCGCAGTCCGCAATGGCGTCGGGCCTTGATGGGCCGACGATAGAGTCGTACCCAAAACAAGTGGTGGGAGAGGCGGAGGAAGGGAGGTGCCCAATATGCCTGAGCGAGTACAGGCCCAACGAGACGCTCAAGACCATACCTGCATGCCTCCACTCCTTCCATTCTCACTGCATCGACGCATGGCTTCCCTTGAATGCTTCCTGCCCTCTTTGCAGGAAGATTAGTTCTTGTTGA 1107 0.5068 MIVANQKSKLANRKSVLSSPPLHNMNIRFLLLFYILPPASIETCSDAVCQDDNLTVRFPFRIQQSQQQPKSCGYPGFDVSCSNQGQTQLKLPSSGGEFNIRGIDYAAQELWINDPENCLPKRILSLNLTGSPFSGVYYQDFSFFNCSSEYLKYRYTPIACLSNSNYTVFATSSRSVFRHLLAVCSFIATVRVPVQQPFYEHVSSSDLSDDLRLSWDSPPCGKCESRGGRCGFQINSTADIACSYFPSQGISKGARYAIGIGIGVPAMLGLIGMLYYVGERCRRVETYVGPEPQSAMASGLDGPTIESYPKQVVGEAEEGRCPICLSEYRPNETLKTIPACLHSFHSHCIDAWLPLNASCPLCRKISSC 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0317 368 SUPERFAMILY RING/U-box 316 365 - -
Prci15g0317 368 ProSiteProfiles Zinc finger RING-type profile. 321 363 IPR001841 -
Prci15g0317 368 SMART ring_2 321 362 IPR001841 -
Prci15g0317 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 367 IPR013083 -
Prci15g0317 368 Pfam Ring finger domain 320 363 IPR001841 -
Prci15g0317 368 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 28 364 IPR046948 -
Prci15g0317 368 Pfam Wall-associated receptor kinase C-terminal 175 244 IPR032872 -
Prci15g0317 368 Pfam Wall-associated receptor kinase galacturonan-binding 44 114 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0317 Prci-Chr15 2073719 2076982 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0317 42 363 C3H Transcription Factor Family AT2G46495 37.725 3.89e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0317 - - pcin:129294476 755.362