Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0306 ATGAGTGACCTAGCTCAGTCTTCTGCCATGTCGGAGTATTTGGATTTGGCAGCAGAAGGAGACCTATTCAAAGCTCCTGAACCTGTAATTGAAGAAACAGTCATAGACTTGGATCCTATGAGCGCAGCCATTTCGATGATATCTTGTGGGGAAGATGTTGTCACCTCGCAGGGACTAAAACCCACGGACTCTCTTCAACATGATCAGCTCCTGAGCGAGGTTTTCTATGAATGCAAAAAAGATATGTTAGAAAAGGAAGCAATTGAGTCACCACTGTCAGAGATTCTGGAAATCAAGGTTCCTGCTCTGAATACAGAAGAGAACCAAGTTCAAGAAAGCCAGCCATTTCCTGGCTTGCCATTGCCAAAAAGTGTGAGTTCAGAATGTTTGAGCTCAATGGACTGGATGCAAGGAACTGCAATGAAGCCTGCTTTTATTGATTTCCCAGGAATTAATTTCAGTGTAGATTATGGCATGCGGAGGGCATTTAGTGAAGGAGATATAAAGGCTCTTGGTAGTGGTAATGTGCACGTTGTCCAATCTACCTTAGAGAGGCCCTTTCCTATCAGTAACTGTACCAGTGAGGAACGCCGAGAAAAGCTCTCTAGATACAGGAGTAAGAAGACAAGGAGAAATTTTGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAACCAAGAATCCGTGGAAGATTTGCCAAGACTGAAGAATTTGACTCAAGGAGGCAATGTTAG 747 0.4418 MSDLAQSSAMSEYLDLAAEGDLFKAPEPVIEETVIDLDPMSAAISMISCGEDVVTSQGLKPTDSLQHDQLLSEVFYECKKDMLEKEAIESPLSEILEIKVPALNTEENQVQESQPFPGLPLPKSVSSECLSSMDWMQGTAMKPAFIDFPGINFSVDYGMRRAFSEGDIKALGSGNVHVVQSTLERPFPISNCTSEERREKLSRYRSKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDSRRQC 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0306 248 ProSiteProfiles CCT domain profile. 197 239 IPR010402 GO:0005515
Prci15g0306 248 Pfam CCT motif 197 239 IPR010402 GO:0005515
Prci15g0306 248 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 108 239 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0306 Prci-Chr15 2018881 2022486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0306 186 243 C2C2-CO-like Transcription Factor Family AT5G15850 47.458 1.82e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci15g0306 CCT 4.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0306 - - pcin:129294779 491.886