Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0305 ATGCGGACACTGGTCTTTTGTTCCCGTATTTCCAGAACTTATCTCAAGAGCTTCAACAACTCGATGAGTACTGTAAAACCCATAAGCCCAATGCTTCAATGCGCAAGTGGAAACAGCTGGAGTTGGCTTTATGTGCTGGATCTGGAAAAGCATGAGAAAAGGAAAGATAGTGACCTAGCTCAGTCTTCTGCCATGTCGGAGTATTTGGATTTGGCAGCAGAAGGAGACCTATTCAAAGCTCCTGAACCTGTAATTGAAGAAACAGTCATAGACTTGGATCCTATGAGCGCAGCCATTTCGATGATATCTTGTGGGGAAGATGTTGTCACCTCGCAGGGACTAAAACCCACGGACTCTCTTCAACATGATCAGCTCCTGAGCGAGGTTTTCTATGAATGCAAAAAAGATATGTTAGAAAAGGAAGCAATTGAGTCACCACTGTCAGAGATTCTGGAAATCAAGGTTCCTGCTCTGAATACAGAAGAGAACCAAGTTCAAGAAAGCCAGCCATTTCCTGGCTTGCCATTGCCAAAAAGTGTGAGTTCAGAATGTTTGAGCTCAATGGACTGGATGCAAGGAACTGCAATGAAGCCTGCTTTTATTGATTTCCCAGGAATTAATTTCAGTGTAGATTATGGCATGCGGAGGGCATTTAGTGAAGGAGATATAAAGGCTCTTGGTAGTGGTAATGTGCACGTTGTCCAATCTACCTTAGAGAGGCCCTTTCCTATCAGTAACTGTACCAGTGAGGAACGCCGAGAAAAGCTCTCTAGATACAGGAGTAAGAAGACAAGGAGAAATTTTGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAACCAAGAATCCGTGGAAGATTTGCCAAGACTGAAGAATTTGACTCAAGGAGGCAATGTTAG 912 0.4408 MRTLVFCSRISRTYLKSFNNSMSTVKPISPMLQCASGNSWSWLYVLDLEKHEKRKDSDLAQSSAMSEYLDLAAEGDLFKAPEPVIEETVIDLDPMSAAISMISCGEDVVTSQGLKPTDSLQHDQLLSEVFYECKKDMLEKEAIESPLSEILEIKVPALNTEENQVQESQPFPGLPLPKSVSSECLSSMDWMQGTAMKPAFIDFPGINFSVDYGMRRAFSEGDIKALGSGNVHVVQSTLERPFPISNCTSEERREKLSRYRSKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDSRRQC 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0305 303 ProSiteProfiles CCT domain profile. 252 294 IPR010402 GO:0005515
Prci15g0305 303 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 146 294 IPR045281 GO:0009909
Prci15g0305 303 Pfam CCT motif 252 294 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0305 Prci-Chr15 2018880 2022486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0305 237 298 C2C2-CO-like Transcription Factor Family AT5G15850 46.032 2.72e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci15g0305 CCT 6e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0305 - - pcin:129294779 601.282