LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci15g0300	ATGGCACTTGAAAAAATTTTAAATAGAACAAAGTCTCAAGTCCCTTCTCAATATGATTCCCAATCTATCGAAGCACGCCACCGGCAAACACCTCTGTTGCTATCTGCCCCTCTCTCTCTCTCTCCCCGCCTTGGCCTGTCTTTCTCGCGGGAAATCGACTTCCTATACATTTCTGATTCTCTGTCGAACTTTTCTTTTAGTACCCTAAGAAATCTGGTGAAAAAAATCCTATCAACATTCCTTTGTTTCCATGGCAGATCCTTTCCGTCTTCTCCTCAGTTCAATCTCATTCATGGTGGCATATCCGTAATGCAATCAGTTGATGTGAACAAGAGAAATCTGAAGCGTTCAAGATCTCTGCCTTTCAATATGCCTGTGACAGACTTTAACGATGCACAAAAATTTGATGACAACAGCCTTTTCCCTGTTGAAGAGATTGTACAATACCCACTGCCAGGATATGTCACGCCGTCTTCAATAAGTTTCAGCCCTGATGATGATTTAATTGCATATTTATTTAGTCCTGATCACACATTGAATAGGAAGGTTTTTTCTTTTGATCTGAAGACAGCTAAACAAGAATTGTTATTCAGTCCCCTTGATGGTGGGCTCGATGAGAGTAATATATCTCCAGAGGAAAGGTTAAGGAGGGAGAGGCTGAGAGAGCGTGGATTAGGGGTGACACGATATGAATGGGTGAATACAAGTTCCAAAAGGAAAGCGATCATGGTGCCTTTGCCTACTGGGATTTATATCCAGGATGTGTCCTATTCAAAAGCAGAGCTCAAGCTTCCAAGTATACCAGGATCACCAATTATTGATCCACGTCTATCGCCAGATGGGTCAATGATTGCCTATGTACAGGACTGTGAATTGTTTGTTCTGAATCTGTTGTCTAATGAATCAAAGCAGTTGAGCCAAGGTGCCAAGGAAAATGGTTTGACTCATGGCCTTGCTGAATATATAGCTCAGGAGGAGATGGACAGGAAAACTGGATATTGGTGGTCACTAGACAGTAAATATATAGCTTTCACTGAAGTTGATTCTTCTGAAATACCACTTTTTAGAATCATGCACCAAGGCAAAAGCTCAGTTGGTTCAGAGGCACAGGAAGACCATCCATATCCTTTTGCAGGAGCTTCAAATGTTAAAGTTCGTCTTGGTGTTGTTTCGGTAGCTGGAGGATCCACTACTTGGATGAATCTTGTCTGTGGGGGAACAGATCAGCGAAATAATGAGGAAGAATATTTGGCAAGAGTCAATTGGATGCACGGGAACGTTCTCACAGCCCAGGTCTTGAATAGGCACCAAACAAAAATGGTGATCCTTAAATTTGATATTAGAACTGGCCAGAGGAAAACTCTATTGGTGGAAGAAAACAGCACATGGGTCAACGTACATGACTGTTTCACCCCTCTTGATAAAGGAGTTACCAAGTTTTCTGGAGGATTTATTTGGGCTAGTGAGAAAACAGGATTTAGACACCTTTATCTTCACGATGCAAATGGGTATTGTTTAGGACCCATTACTGAAGGTGAATGGATGGTTGAGCAAATAGCCGGTGTAAATGAGGCTACAGGTCTAGTATATTTCACTGGGACCCTCGATGGGCCTTTGGAGTCTAACTTATACTGTGCTAAACTTGCCGTAGATGGATGTCAACCACTGCATGCCCCTGTTAGACTTACTCATAGCAAGGGAAAGCACATTGTGGTCCTTGATCATCGTATGCAAAATTTTGTTGATATTCACGATGCACTCGATTGTCCTCCTAGGGTGTTACTTTGCTCATTGAACAATGGAAGCATAATCAAGCCCTTGTATGAGCAGCCATTTGCAATGCCAAGATTCAAAAGGCTTCAACTCAAGCCACCGGAACTGGTGGAAATCCAGGCTAAAGATGGCACCCCATTATATGGGGCCCTATATGTGCCGGATGCGTCAAGATTTGGACCTCCACCTTACAGAACTATGATCCAAGTTTATGGGGGTCCAAGTGTGCAGCTTGTTTCTAATTCTTGGATCGGTACAGTTGACATGAGAGCACAATATTTGCGAAATCAAGGCATCTTAGTTTGGAAGTTGGATAACAGAGGCACGGCTAGACGGGGGTTGACGTTTGAAGGCTGTATAAAGCACTGTCTTGGTCAAATCGATACTGATGATCAGTTAAGTGGAGCTGAATGGCTCGTCAAACAAGGGCTTGCAAAAGTTGGCCACATAGGCTTGTACGGGTGGAGCTACGGCGGGTATCTGTCTGCAATGACCCTGTCGAGATTTCCAGATTTCTTCAAGTGTGCGGTGGCCGGCGCCCCTGTGACGTCATGGGATGGGTATGACACATTTTACACAGAGAAGTACATGGGACTGCCGTCTGAAAATCAAGCAGGCTATGAAAGCGGTGCTGTGACGCACCACGTGCACAAGATGAAAGGGCGCTTGTTGCTTGTGCATGGGATGATCGACGAGAATGTACATTTTCGGCACACTGCCAGGCTTGTCAATGCACTCATTGCGGCTGGAAAGCCTTACGAGCTAATGATTTTTCCGGACGAGCGTCACTTGCCCAGACGTCATAGAGATCGAATTTATATGGAACAGCGGATCTGGGACTTTATAGACAATAATCTGTAG	2634	0.4412	MALEKILNRTKSQVPSQYDSQSIEARHRQTPLLLSAPLSLSPRLGLSFSREIDFLYISDSLSNFSFSTLRNLVKKILSTFLCFHGRSFPSSPQFNLIHGGISVMQSVDVNKRNLKRSRSLPFNMPVTDFNDAQKFDDNSLFPVEEIVQYPLPGYVTPSSISFSPDDDLIAYLFSPDHTLNRKVFSFDLKTAKQELLFSPLDGGLDESNISPEERLRRERLRERGLGVTRYEWVNTSSKRKAIMVPLPTGIYIQDVSYSKAELKLPSIPGSPIIDPRLSPDGSMIAYVQDCELFVLNLLSNESKQLSQGAKENGLTHGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGSEAQEDHPYPFAGASNVKVRLGVVSVAGGSTTWMNLVCGGTDQRNNEEEYLARVNWMHGNVLTAQVLNRHQTKMVILKFDIRTGQRKTLLVEENSTWVNVHDCFTPLDKGVTKFSGGFIWASEKTGFRHLYLHDANGYCLGPITEGEWMVEQIAGVNEATGLVYFTGTLDGPLESNLYCAKLAVDGCQPLHAPVRLTHSKGKHIVVLDHRMQNFVDIHDALDCPPRVLLCSLNNGSIIKPLYEQPFAMPRFKRLQLKPPELVEIQAKDGTPLYGALYVPDASRFGPPPYRTMIQVYGGPSVQLVSNSWIGTVDMRAQYLRNQGILVWKLDNRGTARRGLTFEGCIKHCLGQIDTDDQLSGAEWLVKQGLAKVGHIGLYGWSYGGYLSAMTLSRFPDFFKCAVAGAPVTSWDGYDTFYTEKYMGLPSENQAGYESGAVTHHVHKMKGRLLLVHGMIDENVHFRHTARLVNALIAAGKPYELMIFPDERHLPRRHRDRIYMEQRIWDFIDNNL	877

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci15g0300	877	Gene3D	-	142	618	-	-
	Prci15g0300	877	Pfam	Dipeptidyl peptidase IV (DPP IV) N-terminal region	245	591	IPR002469	GO:0006508
	Prci15g0300	877	SUPERFAMILY	DPP6 N-terminal domain-like	156	611	-	-
	Prci15g0300	877	PANTHER	PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED	145	875	-	-
	Prci15g0300	877	Pfam	Prolyl oligopeptidase family	679	877	IPR001375	GO:0006508\|GO:0008236
	Prci15g0300	877	Gene3D	alpha/beta hydrolase	626	877	IPR029058	-
	Prci15g0300	877	SUPERFAMILY	alpha/beta-Hydrolases	624	877	IPR029058	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci15g0300	Prci-Chr15	1950371	1956132	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci15g0300	625	869	Carbohydrate Esterase	AT5G36210	25.097	6.33e-11	64.3

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci15g0300	K01278		-	gmx:100777293	1364.75

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Prci15g0300	15	1950371	1956132	Prci15g0300	15	1950371	1956132	ECH

Showing 1 to 1 of 1 entries