Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0292 ATGGGGAAGAGAGGAGGCGGTTGGTTCTCGTCAGTGAAGAAAGTTTTCAAATCGTCTTCTAAGGACTCGTCGGCGGCGGCGAGGAAGAAGGATAACGAGAGAAGGCAGCCTGAAGTGGCAGAGGTCGTGTCTTTTGAGCATTTTCCCGCGGAAAGTTCTCATGACGACGTCACCAATGAGAATAGTATCACATCCACGCCGGTGACTGAAGATAGAAATCATGCCATCGTCGTGGCTGCAGCCACGGCTGCGGCTGCAGAAGCTGCAGTTGCAGCGGCTCAAGCAGCGGCAAGAGTTGTTCGATTGGCAGGCTATGGTCGCCACACTAAGGAAGAAAGAGCAGCAACTCTCATTCAATCATACTACAGAGGCTACTTAGCTCGACGCGCTCTGCGTGCCTTGAAAGGATTGGTGAGGCTGCAAGCACTTGTGAGGGGCCATAATGTGCGGAAGCAAGCGCAAATGACAATGCGGTGTATGCAAGCATTGGTTCGAGTACAGGCAAGAGTGAGAGCTCGCCGATTCCAGTTGACCCAAGAGCAGCTTCAGAAGACAGAGGACGAGTATTGCGAGGAGAGAGAACTTGAGCAACAGGTGCCAAAGCCTATGAGTCCCATGAAAAGAATTGACATGAACAGGTGGGACAATAGGCGTCACAGCAGCCACAAAATCCAGGAAAATGATGCCAGGAGACACGAAGCCGTAATGAAGAGGGAAAGAGCTCTTGCCTACGCTCTCAACGGTCAGCAACAGCAGAAGCCATTTCTGCACTCAGACCCGAATGACGATGATGATGGAACCTTCAATTACAACAACGCGCGTGAAAAGGCCCCGTGGGGTTGGAACTGGTTGGAGCGTTGGATGTCATCACAACCGTACAATGTTAGGCACGCGGGGCCACGCGAGACATCTTACATGACCCTTGCCACAACAACCACCACCACCGACGACGACATGTCTGAAAAGACGGTGGAGATGGACATGGTCGCACCCTTAGGCTCAAGTAACGTCAGCGCCATGGGCCTAATGAACCAGGAGTTTCTCGATCCAAGAGCAATGTCCAATAGAAAACACCATCGACAATTCAGCCTAAACGTGCCAAGCTTTATGGCTCCAACCCAGTCTGCAAAAGCCAAGGTGAGAGGTCAAGTCCCGATCAGGCCGAATGGCTCTCCTGGGCCCCAGTGGAACTCATCCACAAAAAGAGGCCCTGGAATTGGGTCGGTCTGTGACTCTTCAAGCTCTGGAGGAGGAACGTCCAATCACAAGTTCCCGAGGAGCCCAAGCCCAAAACTCAATGGGAGTCGCCCGCAGTCTAGGCGGATTGCAGGTGGCAGCCCAGATTATTCTGGGCTTGAGGATTGGGCAGTTCCCCTCGGAGGCCATGGTTGGGCGTGA 1398 0.5315 MGKRGGGWFSSVKKVFKSSSKDSSAAARKKDNERRQPEVAEVVSFEHFPAESSHDDVTNENSITSTPVTEDRNHAIVVAAATAAAAEAAVAAAQAAARVVRLAGYGRHTKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRFQLTQEQLQKTEDEYCEERELEQQVPKPMSPMKRIDMNRWDNRRHSSHKIQENDARRHEAVMKRERALAYALNGQQQQKPFLHSDPNDDDDGTFNYNNAREKAPWGWNWLERWMSSQPYNVRHAGPRETSYMTLATTTTTTDDDMSEKTVEMDMVAPLGSSNVSAMGLMNQEFLDPRAMSNRKHHRQFSLNVPSFMAPTQSAKAKVRGQVPIRPNGSPGPQWNSSTKRGPGIGSVCDSSSSGGGTSNHKFPRSPSPKLNGSRPQSRRIAGGSPDYSGLEDWAVPLGGHGWA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0292 465 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Prci15g0292 465 MobiDBLite consensus disorder prediction 390 440 - -
Prci15g0292 465 Pfam IQ calmodulin-binding motif 112 132 IPR000048 GO:0005515
Prci15g0292 465 Pfam IQ calmodulin-binding motif 138 153 IPR000048 GO:0005515
Prci15g0292 465 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Prci15g0292 465 MobiDBLite consensus disorder prediction 373 465 - -
Prci15g0292 465 MobiDBLite consensus disorder prediction 16 41 - -
Prci15g0292 465 MobiDBLite consensus disorder prediction 23 41 - -
Prci15g0292 465 PANTHER IQ-DOMAIN 5-RELATED 1 427 - -
Prci15g0292 465 SMART iq_5 110 132 IPR000048 GO:0005515
Prci15g0292 465 SMART iq_5 133 154 IPR000048 GO:0005515
Prci15g0292 465 Gene3D - 108 162 - -
Prci15g0292 465 MobiDBLite consensus disorder prediction 249 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0292 Prci-Chr15 1893465 1896969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0292 1 431 IQD Protein Family AT3G49260 49.781 5.20e-102 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0292 - - aprc:113873497 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0292 15 1893465 1896969 Prci15g0292 15 1893465 1896969 ECH