Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0277 ATGTCACCTAGTTTGCGAGCATTAGTGAGTAAAATGATATCCTGGTCTTATTATGCTCCCGAACCTTACACTGTTTGGATCTTCAGTGTGGGACCACGGGATGAACTTCATAAGGAGTGTCTTGCAGCTTTACAAGGTGGATTAATATTGGATAGGAAAGATTTCGAAGCCATTAAAGCAGCATTACAGGAGGCATTTGTCAATGCTGACACAAGTTTGTTAAAACGGCTTGATATGAATGGAGATGAAGATGAATCTGGCGCTACAGCAACTGCAATGTTCATTGGAGATGATATGCTGCTCATTTCACATTTAGGAGACTCATCTGCGGTTCTAAGCCGGTCTGGTAGAGTGGAAGAGCTGACTAGTCCCCACAGACCATATGGGAACAATAAAACCTCTCTTCAAGAAATTAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAATGGTAGAATTTGTGGAGACATTGCTGTTTCTCGTGCATTTGGGGATGTAAGGTTCAAAACAAAGAAGAATGAGATGCTGAGAAAAGGGGTCGAGGAAGGAAGATGGTCAGAAAAATTTGCTTCTCGTGTACAGCTCAACAGAGACTTGGTCATTGCATGCCCTGATGTTTATCAAGTGCATCTTGGCTCGGATGCAGAATTTATAGTATTGGCATCTGATGGCTTATGGGACTACATGAGCAGCTCAGAAGCAGTTTTTTTTGTGAGGAATCAACTTCGAGAGCATGGTAATATTCAGCTAGCTTGTGAATCTCTTGCCCAAGCAGCTCTGGATCGACGCACACAGGATAACATTAGCATCATAATTGCTGATTTAGGGCGGACAGACTGGCAGAACTTGCCGCTTCAGCGGCAAAACGTTATTTACGAGGTGGTCCAGGCTTTAGCCACTATTGGAATTGTGTCACTTGGAATTTGGTTCTCATCTCAGATTTTATGA 948 0.4293 MSPSLRALVSKMISWSYYAPEPYTVWIFSVGPRDELHKECLAALQGGLILDRKDFEAIKAALQEAFVNADTSLLKRLDMNGDEDESGATATAMFIGDDMLLISHLGDSSAVLSRSGRVEELTSPHRPYGNNKTSLQEIKRIREAGGWIVNGRICGDIAVSRAFGDVRFKTKKNEMLRKGVEEGRWSEKFASRVQLNRDLVIACPDVYQVHLGSDAEFIVLASDGLWDYMSSSEAVFFVRNQLREHGNIQLACESLAQAALDRRTQDNISIIIADLGRTDWQNLPLQRQNVIYEVVQALATIGIVSLGIWFSSQIL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0277 315 Pfam Protein phosphatase 2C 51 268 IPR001932 -
Prci15g0277 315 Gene3D - 32 281 IPR036457 -
Prci15g0277 315 CDD PP2Cc 33 275 IPR001932 -
Prci15g0277 315 ProSiteProfiles PPM-type phosphatase domain profile. 1 275 IPR001932 -
Prci15g0277 315 SUPERFAMILY PP2C-like 35 276 IPR036457 -
Prci15g0277 315 SMART PP2C_4 9 273 IPR001932 -
Prci15g0277 315 PANTHER PROTEIN PHOSPHATASE 2C 50 273 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0277 Prci-Chr15 1844173 1847818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0277 33 252 PP2C-type Phosphatase Gene Family AT4G27800 65.611 5.61e-107 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0277 K04457 - vra:106776113 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0277 15 1844173 1847818 Prci15g0277 15 1844173 1847818 ECH