Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0276 ATGGCACTGTCAAGCCCACACATCCAAAAATTAGTCTTAACCAAACTCCATGGCTGTTCCACCTCCAATATTAGTATTCGCAGAAACAGCGTCGCCAATACGAGCAGAGGCCGCTGTTGCTCCGCCATAGCCATTGATGCTCCGTCGTCTTTGTCTGACGTGGCAGGCATCCGATGGGGATCCATTGCTTTGCAGGGTCTTCGGGAAGAGATGGAAGATGACATTATTGTTCGTCCTGATGGCCTCCACGGCTTCTCTTTCGCAGCTGTGTTTGATGGCCATGGAGGATTTTCGTCCGTCCAGTTCCTCAGGGATGAACTTCATAAGGAGTGTCTTGCAGCTTTACAAGGTGGATTAATATTGGATAGGAAAGATTTCGAAGCCATTAAAGCAGCATTACAGGAGGCATTTGTCAATGCTGACACAAGTTTGTTAAAACGGCTTGATATGAATGGAGATGAAGATGAATCTGGCGCTACAGCAACTGCAATGTTCATTGGAGATGATATGCTGCTCATTTCACATTTAGGAGACTCATCTGCGGTTCTAAGCCGGTCTGGTAGAGTGGAAGAGCTGACTAGTCCCCACAGACCATATGGGAACAATAAAACCTCTCTTCAAGAAATTAAAAGAATCAGAGAAGCAGGTGGATGGATTGTCAATGGTAGAATTTGTGGAGACATTGCTGTTTCTCGTGCATTTGGGGATGTAAGGTTCAAAACAAAGAAGAATGAGATGCTGAGAAAAGGGGTCGAGGAAGGAAGATGGTCAGAAAAATTTGCTTCTCGTGTACAGCTCAACAGAGACTTGGTCATTGCATGCCCTGATGTTTATCAAGTGCATCTTGGCTCGGATGCAGAATTTATAGTATTGGCATCTGATGGCTTATGGGACTACATGAGCAGCTCAGAAGCAGTTTTTTTTGTGAGGAATCAACTTCGAGAGCATGGTAATATTCAGCTAGCTTGTGAATCTCTTGCCCAAGCAGCTCTGGATCGACGCACACAGGATAACATTAGCATCATAATTGCTGATTTAGGGCGGACAGACTGGCAGAACTTGCCGCTTCAGCGGCAAAACGTTATTTACGAGGTGGTCCAGGCTTTAGCCACTATTGGAATTGTGTCACTTGGAATTTGGTTCTCATCTCAGATTTTATGA 1161 0.4513 MALSSPHIQKLVLTKLHGCSTSNISIRRNSVANTSRGRCCSAIAIDAPSSLSDVAGIRWGSIALQGLREEMEDDIIVRPDGLHGFSFAAVFDGHGGFSSVQFLRDELHKECLAALQGGLILDRKDFEAIKAALQEAFVNADTSLLKRLDMNGDEDESGATATAMFIGDDMLLISHLGDSSAVLSRSGRVEELTSPHRPYGNNKTSLQEIKRIREAGGWIVNGRICGDIAVSRAFGDVRFKTKKNEMLRKGVEEGRWSEKFASRVQLNRDLVIACPDVYQVHLGSDAEFIVLASDGLWDYMSSSEAVFFVRNQLREHGNIQLACESLAQAALDRRTQDNISIIIADLGRTDWQNLPLQRQNVIYEVVQALATIGIVSLGIWFSSQIL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0276 386 CDD PP2Cc 57 346 IPR001932 -
Prci15g0276 386 PANTHER PROTEIN PHOSPHATASE 2C 46 344 IPR015655 GO:0004722|GO:0006470
Prci15g0276 386 ProSiteProfiles PPM-type phosphatase domain profile. 58 346 IPR001932 -
Prci15g0276 386 Pfam Protein phosphatase 2C 60 339 IPR001932 -
Prci15g0276 386 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Prci15g0276 386 Gene3D - 57 352 IPR036457 -
Prci15g0276 386 SUPERFAMILY PP2C-like 53 347 IPR036457 -
Prci15g0276 386 SMART PP2C_4 48 344 IPR001932 -
Prci15g0276 386 FunFam Protein phosphatase 2C 57 57 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0276 Prci-Chr15 1844173 1848137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0276 1 323 PP2C-type Phosphatase Gene Family AT4G27800 60.615 4.60e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0276 K04457 - vra:106776113 618.616