Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0268 ATGGACACAGCTCAGTGGGCACAGGGGATCGGAGTGGTTAAACAGCCCCTGGTGGAAGGTTCAGTTCCAAAGCCTCCTGTGACCGAAAGAAAGGCTAGGCCTCAGAAAGATCAAGCTTTGAACTGCCCGAGGTGCAATTCAACCAACACTAAATTCTGCTACTACAATAACTACAGCCTCTCTCAGCCAAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACCGAGGGTGGGTCCCTCAGAAACGTTCCCGTGGGTGGAGGCTCCCGAAAGAACAAGAGACCTTTAACTTCTTCCTCCTCCTCTTCGTCTCCATCAGCAATATCGTCAAAGAAGCTTCCTGATCTGAACCCAAAGATCCACCAAGGTCAGGATCTTAACTTAGCATGCCCCCCACCAGCACCCGAGGACTACAGCAATAGCATATCGAAATTTATCGAGGTTCCTTTCAGTACTGAAGACAAGAGCACACCTTCTCATCATGATCAGTTATCCGCCATGGAGCTTCTGAAAACTGGAATTCCGTCGTCGAGGACTTTATGTTCTTTGATGCCCATGTCGGCGACGGATTCCTCCGGTTCAGCAATGTATAATTCAAGCGGGTTTCCTAATTTGCAAGATTTTAAGCCTCCTTCCGGGCTTAGTTTCAGTCTGGAAGGGTATGCAAATGGGTTCGGGGGTATTTCTGGAATGCACGAGGGAAGTGGTGGCGATGGTGGTGCGAGGTTGTTGTTTCCTACTGAGGATTTGAAGCAAGTTCCGAGTAGTGCTGATCATTATGAGCAGAATAGAAGCCAGGCGGATTCAACGGGGTTTTGGAATGGCATGTTAGGTGGAGGATCGTGGTGA 849 0.49 MDTAQWAQGIGVVKQPLVEGSVPKPPVTERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPLTSSSSSSSPSAISSKKLPDLNPKIHQGQDLNLACPPPAPEDYSNSISKFIEVPFSTEDKSTPSHHDQLSAMELLKTGIPSSRTLCSLMPMSATDSSGSAMYNSSGFPNLQDFKPPSGLSFSLEGYANGFGGISGMHEGSGGDGGARLLFPTEDLKQVPSSADHYEQNRSQADSTGFWNGMLGGGSW 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0268 282 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Prci15g0268 282 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Prci15g0268 282 MobiDBLite consensus disorder prediction 81 133 - -
Prci15g0268 282 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 186 IPR045174 GO:0003700|GO:0006355
Prci15g0268 282 MobiDBLite consensus disorder prediction 92 111 - -
Prci15g0268 282 Pfam Dof domain, zinc finger 37 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0268 Prci-Chr15 1776216 1777920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0268 30 282 C2C2-Dof Transcription Factor Family AT3G61850 45.255 8.52e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci15g0268 zf-Dof 1.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0268 - - gmx:778114 332.798