Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0257 ATGGCGGGTTCTTCCGAGACGAGGCTCGTCCAAGATTTGTTATTATACGCGGCGAGTGCGGCACTCAGCTGCTTGGTTTTGTTCGCCGGGCTTCGACACCTCGACCCTAATCGTGAGACGTCAAAAAAAGCTCTTCAACGCAGGAAAGAGATAGCTAAGCGTCTCGGTCGTCCTGTCATTCAAACAAACGCTTATGAGGATGTCATAGCCTGTGATACTATTAATCCCGATCACATTGATGTGAAGTTTGACTCTATTGGGGGACTACAAACAATCAAGCAAGCTTTGTTTGAGCTTGTTATACTGCCCCTGAAACGACCTGAACTATTTTCTCACGGCAAACTTCTTGGCCCACAAAAAGGGGTCCTCTTGTATGGACCCCCGGGTACTGGGAAAACCATGCTCGCTAAAGCAATTGCAAAGGAGTCTGGATCAGTTTTCATTAATGTAAGGATATCAAACCTGATGAGCAAGTGGTTTGGCGATGCCCAGAAACTCGTGGCTGCTGTATTTAGCCTGGCTTATAAGGTCCAGCCCGCTATCATATTTGTTGATGAAGTTGACAGCTTTTTGGGTCAGCGCCAGCCAACAGATCATGAGGCAATGTTAAACATGAAAACTGAGTTCATGACTTTATGGGATGGATTTACCACCGATCAGAATGCTCGAATTATGGTCCTTGCAGCAACCAATCGTCCCTCAGAACTTGATGAGGCCGTTTTACGGCGGTTTCCCCAAGCCTTTGAAATTGGACTTCCAGATCCAAGGGAGAGGGCTGAGATATTGAAGGTTATCTTAAAGGGTGAGAGAGTTGAAGACAACATTGACTTTGATCATATAGCTGCCTTGTGTGAGGGGTATACCGGTTCAGATCTCTTTGACCTCTGCAAGAAGGCTGCCTATTTTCCCATTAGGGAATTGCTGGATGAAGAAAAACAAGGGAGAAATGCTCCTGAACCAAGGTATTTGACACTGTCAGATTTGGAGAAGGCTCTCACCACTTCGCGAAAAACAAAGGTTGCTGCTGGTGAATACAGTGGATTAAATGTACAGTCACGGAGAAGGCCAGGACACAGGGAGTCAGGTGATTATCAGTTTCAAGATGCAATCAATGAACTCTCTAAGCTTGTGGTTTCTCAAATTATTAACCTCCAATCAGATGCGCAGGATCCATAA 1176 0.4566 MAGSSETRLVQDLLLYAASAALSCLVLFAGLRHLDPNRETSKKALQRRKEIAKRLGRPVIQTNAYEDVIACDTINPDHIDVKFDSIGGLQTIKQALFELVILPLKRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGSVFINVRISNLMSKWFGDAQKLVAAVFSLAYKVQPAIIFVDEVDSFLGQRQPTDHEAMLNMKTEFMTLWDGFTTDQNARIMVLAATNRPSELDEAVLRRFPQAFEIGLPDPRERAEILKVILKGERVEDNIDFDHIAALCEGYTGSDLFDLCKKAAYFPIRELLDEEKQGRNAPEPRYLTLSDLEKALTTSRKTKVAAGEYSGLNVQSRRRPGHRESGDYQFQDAINELSKLVVSQIINLQSDAQDP 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0257 391 SMART AAA_5 118 254 IPR003593 GO:0016887
Prci15g0257 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 334 IPR027417 -
Prci15g0257 391 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Prci15g0257 391 Gene3D - 253 335 - -
Prci15g0257 391 CDD RecA-like_ATAD1 85 250 - -
Prci15g0257 391 FunFam ATPase family AAA domain-containing protein 1 80 256 - -
Prci15g0257 391 Gene3D - 80 338 IPR027417 -
Prci15g0257 391 Pfam AAA+ lid domain 274 310 IPR041569 -
Prci15g0257 391 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 30 343 - -
Prci15g0257 391 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0257 Prci-Chr15 1716174 1720945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0257 116 318 Calmodulin-binding Proteins AT3G56690 36.408 1.17e-37 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0257 K22530 - gmx:100796908 650.973