Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0243 ATGGGTGAATTTGGCGTTTCGGACAAGGAAGCTGCAAAGAATAGCAGCTATGGTGTTGTTGGGCCGGGTGTGACGGCGCAGAAGCAGAACCTCGAAGCGTTCCCTAGTAAGACCATGATAATGAGGGTTGACGATCCTCCACTATATGGTCCCTCCTTTGTTTCTGGTGGAGACGGTGATGGTCCTAAAACTTGTGAGTCCCTGACTAATTATGCAAACCATTATCTTAATGCCGCTTCTGCTTCTGGTGCTGCACTTGCTAGACCCTTGCAGCCTTTTCACGTTTCTGCCGCAACCGCCTTCAAATCCTCAGGAGGGATGATGGCGGCCTCGCTGGGATTTCCTTTCACAAAAGCACAATGGAAGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCTTCTATTCCTGTTCCTCCTCATCTGCTCATCCCCGTGCCTGCTTCTCGCTCTCCCTTGGATGCTGGCTTCAATCTAAGGTTTTCAAGCAGTAGTGATGCAGAACCAGGGAGATGCAGAAGAACAGATGGGAAAAAATGGAGATGCTCAAAAGACGTGGCCCCTAACCACAAGTATTGCGAGCGACATATGCACAGGGGTCGCCCCCGTTCAAGAAAGCTTGTGGAAATTCAAGCCACCGCCGACAATAATCAGCAAATCAACGGAACTAGCCATGATTATTCTTCTTTATCTCCTCCTACCATGGCCATCTCTCACTCCACAATCCGTAAAGGTGGGTGTTCACCTCCGTTTCTTGCGTCTGCCACCACCAGTCAGCCACACTATGGATCTTCCCTTTCTCTAGATAAGCTTGGCGTCAAAGCTGCAAATTTTGATTCCCTTGCTTCTGTTCCGAGAGGATTGGACTGGATGCTGAAAGGAGACCCTAATCCCATGGATCCACAATGGCATCCGCCGATGCAGAACAAACGGGGATCGAATAGGGGAAGTTGCTGCAACAAGGACGCCTCAATTTCAAGTACTCATTCCAAGGGCCCTCTGTACATGAATCCTAACGGTGTTTTCAGCTGTGAAGTAGAGCAACACAAGAAGCGCTCCCCTCTGTACCTCAGCCCTGTTGGAGTGCCTCTGGAGAATCCTCGGCGGGTAAAACCAAGGGCTTTCATTGATGCTTGGTCGAGCGCGCAAATCAATGGCAGCAAAGGGAGCTCTGTTGCATCAAACGATAGGCTATCGCTCTCTTCGCTTGATCTGCCGGTGGGTAGTGTGGGTGTGGAGGAAGGCACGGGTTCTGTTCGTGTGGGCTTGGGCCATATGGATTCCCCTGCAACCTGGGCGGCAGGCTCAACACCTGGGGGCCCACTTGCGGAAGTGTTGAGGCCCAGCAAGGTTTGA 1362 0.5103 MGEFGVSDKEAAKNSSYGVVGPGVTAQKQNLEAFPSKTMIMRVDDPPLYGPSFVSGGDGDGPKTCESLTNYANHYLNAASASGAALARPLQPFHVSAATAFKSSGGMMAASLGFPFTKAQWKELERQAMIYKYMMASIPVPPHLLIPVPASRSPLDAGFNLRFSSSSDAEPGRCRRTDGKKWRCSKDVAPNHKYCERHMHRGRPRSRKLVEIQATADNNQQINGTSHDYSSLSPPTMAISHSTIRKGGCSPPFLASATTSQPHYGSSLSLDKLGVKAANFDSLASVPRGLDWMLKGDPNPMDPQWHPPMQNKRGSNRGSCCNKDASISSTHSKGPLYMNPNGVFSCEVEQHKKRSPLYLSPVGVPLENPRRVKPRAFIDAWSSAQINGSKGSSVASNDRLSLSSLDLPVGSVGVEEGTGSVRVGLGHMDSPATWAAGSTPGGPLAEVLRPSKV 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0243 453 MobiDBLite consensus disorder prediction 309 334 - -
Prci15g0243 453 Pfam WRC 169 211 IPR014977 -
Prci15g0243 453 ProSiteProfiles WRC domain profile. 168 212 IPR014977 -
Prci15g0243 453 PANTHER GROWTH-REGULATING FACTOR 5 96 396 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci15g0243 453 ProSiteProfiles QLQ domain profile. 115 150 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci15g0243 453 Pfam QLQ 115 148 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci15g0243 453 MobiDBLite consensus disorder prediction 308 334 - -
Prci15g0243 453 SMART QLQ_2 114 150 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0243 Prci-Chr15 1609447 1612576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0243 106 261 GRF Transcription Factor Family AT5G53660 48.235 1.84e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci15g0243 WRC 1.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0243 - - pcin:129294126 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0243 15 1609447 1612576 Prci15g0243 15 1609447 1612576 ECH