Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0242 ATGGGTGAATTTGGCGTTTCGGACAAGGAAGCTGCAAAGAATAGCAGCTATGGTGTTGTTGGGCCGGGTGTGACGGCGCAGAAGCAGAACCTCGAAGCGTTCCCTAGTAAGACCATGATAATGAGGGTTGACGATCCTCCACTATATGGTCCCTCCTTTGTTTCTGGTGGAGACGGTGATGGTCCTAAAACTTGTGAGTCCCTGACTAATTATGCAAACCATTATCTTAATGCCGCTTCTGCTTCTGGTGCTGCACTTGCTAGACCCTTGCAGCCTTTTCACGTTTCTGCCGCAACCGCCTTCAAATCCTCAGCAGGAGGGATGATGGCGGCCTCGCTGGGATTTCCTTTCACAAAAGCACAATGGAAGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCTTCTATTCCTGTTCCTCCTCATCTGCTCATCCCCGTGCCTGCTTCTCGCTCTCCCTTGGATGCTGGCTTCAATCTAAGGTTTTCAAGCAGTAGTGATGCAGAACCAGGGAGATGCAGAAGAACAGATGGGAAAAAATGGAGATGCTCAAAAGACGTGGCCCCTAACCACAAGTATTGCGAGCGACATATGCACAGGGGTCGCCCCCGTTCAAGAAAGCTTGTGGAAATTCAAGCCACCGCCGACAATAATCAGCAAATCAACGGAACTAGCCATGATTATTCTTCTTTATCTCCTCCTACCATGGCCATCTCTCACTCCACAATCCGTAAAGGTGGGTGTTCACCTCCGTTTCTTGCGTCTGCCACCACCAGTCAGCCACACTATGGATCTTCCCTTTCTCTAGATAAGCTTGGCGTCAAAGCTGCAAATTTTGATTCCCTTGCTTCTGTTCCGAGAGGATTGGACTGGATGCTGAAAGGAGACCCTAATCCCATGGATCCACAATGGCATCCGCCGATGCAGAACAAACGGGGATCGAATAGGGGAAGTTGCTGCAACAAGGACGCCTCAATTTCAAGTACTCATTCCAAGGGCCCTCTGTACATGAATCCTAACGGTGTTTTCAGCTGTGAAGTAGAGCAACACAAGAAGCGCTCCCCTCTGTACCTCAGCCCTGTTGGAGTGCCTCTGGAGAATCCTCGGCGGGTAAAACCAAGGGCTTTCATTGATGCTTGGTCGAGCGCGCAAATCAATGGCAGCAAAGGGAGCTCTGTTGCATCAAACGATAGGCTATCGCTCTCTTCGCTTGATCTGCCGGTGGGTAGTGTGGGTGTGGAGGAAGGCACGGGTTCTGTTCGTGTGGGCTTGGGCCATATGGATTCCCCTGCAACCTGGGCGGCAGGCTCAACACCTGGGGGCCCACTTGCGGAAGTGTTGAGGCCCAGCAAGGTTTGA 1365 0.5106 MGEFGVSDKEAAKNSSYGVVGPGVTAQKQNLEAFPSKTMIMRVDDPPLYGPSFVSGGDGDGPKTCESLTNYANHYLNAASASGAALARPLQPFHVSAATAFKSSAGGMMAASLGFPFTKAQWKELERQAMIYKYMMASIPVPPHLLIPVPASRSPLDAGFNLRFSSSSDAEPGRCRRTDGKKWRCSKDVAPNHKYCERHMHRGRPRSRKLVEIQATADNNQQINGTSHDYSSLSPPTMAISHSTIRKGGCSPPFLASATTSQPHYGSSLSLDKLGVKAANFDSLASVPRGLDWMLKGDPNPMDPQWHPPMQNKRGSNRGSCCNKDASISSTHSKGPLYMNPNGVFSCEVEQHKKRSPLYLSPVGVPLENPRRVKPRAFIDAWSSAQINGSKGSSVASNDRLSLSSLDLPVGSVGVEEGTGSVRVGLGHMDSPATWAAGSTPGGPLAEVLRPSKV 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0242 454 MobiDBLite consensus disorder prediction 308 335 - -
Prci15g0242 454 PANTHER GROWTH-REGULATING FACTOR 5 97 397 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci15g0242 454 ProSiteProfiles QLQ domain profile. 116 151 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci15g0242 454 Pfam WRC 170 212 IPR014977 -
Prci15g0242 454 MobiDBLite consensus disorder prediction 310 335 - -
Prci15g0242 454 ProSiteProfiles WRC domain profile. 169 213 IPR014977 -
Prci15g0242 454 SMART QLQ_2 115 151 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci15g0242 454 Pfam QLQ 116 149 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0242 Prci-Chr15 1609447 1612579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0242 104 262 GRF Transcription Factor Family AT5G53660 47.399 1.71e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci15g0242 WRC 1.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0242 - - pcin:129294126 902.508