Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0241 ATGCTGCAACATAATTTTTTTTCACTGCTATTGATAGATAGACGCTTTGGTGTGGTGCATATTTTCTTTTTCATGGGGAAGGCAGCAGGAGGCTCATGGCTGGCTACTGTGACAAGGGCATTCAGGTCTCCTACCAAAGAAAAGGACAAGAGAAGCAGGAGGGCAAGAGAAGAGCATGAACAAGAGGACGACAAAAAGAAGAGGGGAAAACGAAGATGGATCTTCAGAAACCCCTTCGGCCAAGAGACAACAGCCCAACATTGCGAAGAAAGAACCATAACGAGTATAGCTGATGTGATCGCAGCAAGTTGTAATGCAGAGCATATGCATGCAATTGCAGTGGCCATGGCAACCACAGCAGCTGCTGAGGCAGCATTAGCAGCTGCTCAAGCAGCTGTGGAGGTCGTTCGCCTTTCTAAGCCTTCCTTCTTTGTCAGAGAACACCACGCAGCCATTGTAATCCAAACAGTTTTCAGAGGCTACCTGGCCAGGAGAGCTCTTGGGGCACTTAAAGGATTAGTGAAGCTGCAAGCATTAGTAAGAGGTCATAATGTACGAAAGCGAGCTAAACTAACCCTGAAGTGCATGCAAGCTCTCGTTCGAGTTCAAACTCGTGCATGCCAACAGCGAGCCAAGCGGCTCTCACAACTTGAAAGAGACGCAGATTCCACAGACGAGAGCGGGACAGAGGAAGTGCGGATGCGCTGGGATGACCACCCACGAACAGTGGATAATATTCGAGCTGTGTTACAGCGAGCAAAGGAAGTTTCCTTGAGACGTGAAATGTCCCTGGCTGATGCCTTCTCTCATCAGATATGGACAACTAGTAAAGAAGCATGGGCCAGCGAGGGAGAGGTGGAAGACAGCGACGGGTCCAGGTGGAGGAGAAGGTATAGAGAGAACAGAGGCAGAGCTTCGTGTGATCAAAGAGACCCCATCAAAATAGTTGAAATGGATACATACAGTCCTCACTCTAACACTGTTCCCACTGATAAAGAGAGATCATATTGTGGGTATAAACCACCGAAACTTTCAATGTCTTCGCCTGGGTATAATAAAGCCCACCACGAGATCTCAATGGCCATGACACCACCACCAGTGAAGATGAAGGATGTTGATCAGGTGCATTCAGCTAGTACTTCTCCTCGTGCAAAGTCCAATCTTTTGATGCCAAACTATATGACAGCCACTGCATCTGCTAAGGCTCGGTCTCGCTCACAAAGCGCCCTCAGACACTGGAATTCAACCCCCGAGAAGGAGAAAATGGGATCCATCAAGAAATGCCTTTCATTCCCAGTTCCTTATTCCTGCGATGGTGCTCACACTTGA 1329 0.4823 MLQHNFFSLLLIDRRFGVVHIFFFMGKAAGGSWLATVTRAFRSPTKEKDKRSRRAREEHEQEDDKKKRGKRRWIFRNPFGQETTAQHCEERTITSIADVIAASCNAEHMHAIAVAMATTAAAEAALAAAQAAVEVVRLSKPSFFVREHHAAIVIQTVFRGYLARRALGALKGLVKLQALVRGHNVRKRAKLTLKCMQALVRVQTRACQQRAKRLSQLERDADSTDESGTEEVRMRWDDHPRTVDNIRAVLQRAKEVSLRREMSLADAFSHQIWTTSKEAWASEGEVEDSDGSRWRRRYRENRGRASCDQRDPIKIVEMDTYSPHSNTVPTDKERSYCGYKPPKLSMSSPGYNKAHHEISMAMTPPPVKMKDVDQVHSASTSPRAKSNLLMPNYMTATASAKARSRSQSALRHWNSTPEKEKMGSIKKCLSFPVPYSCDGAHT 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0241 442 Pfam IQ calmodulin-binding motif 174 190 IPR000048 GO:0005515
Prci15g0241 442 Pfam IQ calmodulin-binding motif 148 166 IPR000048 GO:0005515
Prci15g0241 442 MobiDBLite consensus disorder prediction 44 68 - -
Prci15g0241 442 Pfam Protein of unknown function (DUF4005) 374 437 IPR025064 -
Prci15g0241 442 ProSiteProfiles IQ motif profile. 147 175 IPR000048 GO:0005515
Prci15g0241 442 SMART iq_5 169 190 IPR000048 GO:0005515
Prci15g0241 442 SMART iq_5 146 168 IPR000048 GO:0005515
Prci15g0241 442 Gene3D - 145 198 - -
Prci15g0241 442 ProSiteProfiles IQ motif profile. 171 198 IPR000048 GO:0005515
Prci15g0241 442 MobiDBLite consensus disorder prediction 213 232 - -
Prci15g0241 442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 191 IPR027417 -
Prci15g0241 442 PANTHER IQ-DOMAIN 5-RELATED 25 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0241 Prci-Chr15 1606049 1608089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0241 25 434 IQD Protein Family AT1G01110 37.143 6.11e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0241 - - cave:132174964 373.629