Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0216 ATGGGTGCGGCCGTCGAGTGTTGTCCGCCGCGCGTTGATGAGGTGGCGGTTTTGCCTCTGAATTCGCTTCCTCTAGGTTTCAGGTTTCGGCCGACGGATGAGGAGCTGATCGATTACTATTTGCGACAGAAGATCAACGGAAATGGGGGTGACGTATGGGTTATTCGAGAAATTGATGTTTGCAAATGGGAGCCTTGGGATTTGCCTGATTTATCGGTTATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGATCGCAAGTATCCGAATGGGCATCGATTGAACCGGGCAACGACTCATGGGTACTGGAAGGCAACGGGCAAAGATCGCAAAATTAAGTCTGGGTCGACCGTGATTGGAATGAAGAAGACTTTAGTGTTCTATACGGGTCGCGCACCCAGAGGGAAGAGGACCAACTGGGTTATGCATGAGTACCGTCCTACCCTAAAGGAGCTCGATGGTACCAATCCTGGACAGAGTGCATATGTCCTTTGTCGTTTATTTAAGAAGCAAGATGAGACTCTTGAAAGTTCAAACTGTGAGGAAAATGACCGGACTGTGTCTACTCCAGCCACTGCTAATTACTCTCCAGAAGAAATGCAATCAGATGTGGTTCCAATGGCAGCTTCTCCATCACTGGCTACTGAAGATGACAAGAACAGGGCAGTTCCATTCTCTGTCTCTGAGAATTCTGAGGAGGCCACATCCAACATTATAACACCAATTGATTGCAACGGTGAAGAATGTGATACTTGTGATGTGCAGAATAAGATTGTTATTCCAACAACTGCAGAGGAAGATCAGCTTCTGAACTTTGACATGTTTTATGACCCAACAACTGAACCATGGGATGACAAACTCTTCTCTCCTGCACACCAGCATATCCCACCAGAATTTTGTTTTCCTTTAAGCAATGAAGTGGATAATTGTGGCTTGCAACTTCAGCATGATACAAATGAGGTAAATATGGCTGAATTTTTAAACTCAGTCATCAACTGGGATGAGTTATCCTATGATTCCAGCAGTCAAAAGCCCACTTCCACGTTGGTTGATGCTAAGGATAATGGATCAGGCAGTGATTCAGATGTGGAAATGCCAAATATACTGAGTCTGCAAGCATTGCATGCCGTGAATCCTGGGGCAATTGACAAAAGGACTCCTTCAAAGTTGGAGAAAATTTCGCACTTTAACTGCACCATCAGCTCTGAGCCTAGTGGTGATGAGGAGAAGAGCCATACTGGATCGTTACGAAATAATTATCTGATGGCTTCCTCACCTGATTCTGGCATGGGCCAAGTATACAACGTAGACAATGAATCCAGGAATTATAATCCTGTTGTTAATGGTGATATTGGAACTGGAATCAGGATAAGGCCTCGCCAAGTACGGAATGACCTGCCAAACACAAACCCCGCAAGCCAAGGTACTGCACCCAGGAGAATACGTCTGCAACGTAAACTTCAATTGCACCCTCTTAGCTCCAATGAGGTGGTCAAAGGTGGGAGCTGTGTACCAGAGGACCATGGTTCAAAACCAATTGTTGTGGGGGGGATGAAAGCTTCAGAAAATCACGCTGCTGATGCGGATGCTATGGTTGCCAAAGTTGTAAACGAACCCCAGAAGAACTCTCCCGAGTTAACTGATATTACGGAGATTGCTCAGCAACATGCTACAAAAGCGGCGTCCATTAAACTCGAGATTTGGTCATCTGTTGTATTTTTTGTCACTGTACTGGTTTTATTGGTCTTCCTAGCTTTCGTGTGGGGGGCATTGTAG 1785 0.4577 MGAAVECCPPRVDEVAVLPLNSLPLGFRFRPTDEELIDYYLRQKINGNGGDVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRKIKSGSTVIGMKKTLVFYTGRAPRGKRTNWVMHEYRPTLKELDGTNPGQSAYVLCRLFKKQDETLESSNCEENDRTVSTPATANYSPEEMQSDVVPMAASPSLATEDDKNRAVPFSVSENSEEATSNIITPIDCNGEECDTCDVQNKIVIPTTAEEDQLLNFDMFYDPTTEPWDDKLFSPAHQHIPPEFCFPLSNEVDNCGLQLQHDTNEVNMAEFLNSVINWDELSYDSSSQKPTSTLVDAKDNGSGSDSDVEMPNILSLQALHAVNPGAIDKRTPSKLEKISHFNCTISSEPSGDEEKSHTGSLRNNYLMASSPDSGMGQVYNVDNESRNYNPVVNGDIGTGIRIRPRQVRNDLPNTNPASQGTAPRRIRLQRKLQLHPLSSNEVVKGGSCVPEDHGSKPIVVGGMKASENHAADADAMVAKVVNEPQKNSPELTDITEIAQQHATKAASIKLEIWSSVVFFVTVLVLLVFLAFVWGAL 594
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0216 594 SUPERFAMILY NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Prci15g0216 594 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Prci15g0216 594 MobiDBLite consensus disorder prediction 345 364 - -
Prci15g0216 594 MobiDBLite consensus disorder prediction 179 206 - -
Prci15g0216 594 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Prci15g0216 594 FunFam Nac domain-containing protein 86 32 176 - -
Prci15g0216 594 Gene3D NAC domain 32 178 IPR036093 GO:0003677|GO:0006355
Prci15g0216 594 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 219 - -
Prci15g0216 594 MobiDBLite consensus disorder prediction 184 202 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci15g0216 Prci-Chr15 1467246 1471356 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0216 15 509 NAC Transcription Factor Family AT4G35580 38.294 7.17e-97 304
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci15g0216 NAM 2.1e-36 No_clan
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0216 - - gmx:100778903 645.58
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0216 15 1467246 1471356 Prci15g0216 15 1467246 1471356 ECH