Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0215 ATGATTACAAGAAGCTTTGCTGATGGCATAACGAAACCGAGTTTCCTACTAACACAGACAAAAATGCCCATTCTAGCATTTTGCCATTCTAAGTTTAGTTCTTCATTAACTCTACAGTTGCCTTGTAACTGCATGAGAAGAATGGGTTTGATTACGCAATTTAAATGTTCTGTTGCTAATAGAACATTGACGTCTAGTTCTGTGGCTTCACCTACATCCAAACCAGGCTCCATTGGCTTGAACAGGAAACAAGGGCGTTCATCCTCATTATATAGTCGTCCTAGTTTATCAGAAATGAACAAAGAGAGGATGGCAAACCGTGAGAAGGTTTACGCTTTCTTGCGGGGGATTGGTATTGTCCCTGATGAGCTTGATGGTCTGGAACTTCCTGTGACAGTTGAAGTCATGAGGGAACGAGTAGACTTTCTTCACAATTTAGGGCTTACAATTGAAGACATCAATAATTATCCATTAGTTCTTGGCTGCAGTGTCAAAAAGAATATGATTCCTGTGCTTGATTACCTTGGTAAATTGGGAGTCAGGAAATCTACTTTCACACAATTCTTGCGGAGATATCCACAAGTTCTTCATGCTAGTGTTGTTGTTGACCTTGAACCAGTGGTTAAGTATCTTGAGGGGATGGATATCAAGCCCAATGATATTCCCCGGGTTCTCGAGACATATCCAGAAGTGCTAGGATTCAAGCTTGAGGGAACCATGAGCACATCAGTTGCTTATTTGGTTGGTATTGGTGTTGGAAGAAGAGAAATTGGAGGGGTTCTAACACGATACCCTGAGATTTTGGGAATGCGAGTTGGCCGAGTAATCAAGCCTTTTGTGGAGTACCTGGAAAGCTTGGGAATTCCAAGATTAGCCATTGCAAGAATAATAGAGAAACGACCTTATATTCTTGGCTTTGGATTGGCTGAGAAGGTGAAGCCAAATGTTGAAGCTCTTGAAGAGTTCAATATTAGAAGAGCATATCTGCCCTCTGTAATTGCACAGTTTCCTGATATCATGGGAATGGACTTGAAGCCAAGGCTAGAGAATCAAAGCAATTTACTCAAATCTTTACTTGATTTGGATTCTCAAGATTTTGGTAGAGTTGTTGAGAAGATGCCACAGGTGATCAGCCTCAGTAGTTCACCTATGCTGAAGCATCTTACTTTACTCAAGGATTGTGGGTTTTCCTTGCAACAAATGAAGAAGATGATTGTTGGTTGCCCTCAACTTCTCGCTTTAAACATTGACATCATGAAACTTAGCTTTGATTACTTTCAAAAGGAGATGGGGAGGCCTTTAGAAGACTTGGTTGCTTTCCCAGCCTTTTTTACATATGGTCTGGAGTCAACTGTAAAACCTAGGCATAAGATGGTTGCCAAGAAGGGAGTGAAGTGTTCCCTCGCATGGATGCTTTGTTGCTCAGATGACAAATTTGAGCAACGAATGGATTATGACACTATTGACATGGACGAAATGGAAACGGGACCATCATTTGACATGAATGCACTGATGGAACCAAGGAGTGATGAGTCAGCTTCTGATTACGATGACAGTGATGATGATGATGATGAAGAATAG 1581 0.4124 MITRSFADGITKPSFLLTQTKMPILAFCHSKFSSSLTLQLPCNCMRRMGLITQFKCSVANRTLTSSSVASPTSKPGSIGLNRKQGRSSSLYSRPSLSEMNKERMANREKVYAFLRGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVVVDLEPVVKYLEGMDIKPNDIPRVLETYPEVLGFKLEGTMSTSVAYLVGIGVGRREIGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAIARIIEKRPYILGFGLAEKVKPNVEALEEFNIRRAYLPSVIAQFPDIMGMDLKPRLENQSNLLKSLLDLDSQDFGRVVEKMPQVISLSSSPMLKHLTLLKDCGFSLQQMKKMIVGCPQLLALNIDIMKLSFDYFQKEMGRPLEDLVAFPAFFTYGLESTVKPRHKMVAKKGVKCSLAWMLCCSDDKFEQRMDYDTIDMDEMETGPSFDMNALMEPRSDESASDYDDSDDDDDEE 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0215 526 MobiDBLite consensus disorder prediction 66 100 - -
Prci15g0215 526 FunFam Transcription termination factor mterf4, chloroplastic 136 273 - -
Prci15g0215 526 Gene3D Transcription termination factor 3, mitochondrial 270 487 IPR038538 -
Prci15g0215 526 Gene3D Transcription termination factor 3, mitochondrial 77 201 IPR038538 -
Prci15g0215 526 Pfam mTERF 172 480 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 SMART mt_12 434 465 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 SMART mt_12 87 120 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 SMART mt_12 402 433 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 SMART mt_12 330 362 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 SMART mt_12 367 397 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 MobiDBLite consensus disorder prediction 494 526 - -
Prci15g0215 526 MobiDBLite consensus disorder prediction 66 96 - -
Prci15g0215 526 PANTHER CGI-12 PROTEIN-RELATED 171 482 IPR003690 GO:0003690|GO:0006355
Prci15g0215 526 FunFam Transcription termination factor MTERF4, chloroplastic 274 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0215 Prci-Chr15 1455153 1457875 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci15g0215 mTERF 6.3e-106 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0215 K15031 - qsa:O6P43_020032 777.319