Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0186 ATGAGAAGAATAGCTTGGATACAGCAGGCCTTGCACTTTTATTTGTTCCTGCTGTTGTTTTACATCAGATCCTTCTTGGTAGATGAGATGCCCCAAATAAAGCTACAGCTGGTCACCACACTTGATAAAGGACGGGGTATGATATCATCGTGTGACATACCTCCAGCTTCTTTAGTTCATCGTGAAGAACCTTATGCCATGATAGTATTAAAGCAATGCCGAGAAACACATTGCCATTACTGCTTGAATGACCTACCTTCTGATGCAGTTCCTTGTAGATCTTGTTCAATACCGCTATATTGCTCTCAGCAATGCCAGATACAGGCTGGTGGACAGATGTTTAAGATTAATCCTGAAGACCATGGCATTCTTAAAAGTCTACCCAGTGATCTTGGGACGTATGCTACAGGAATTATATTAGGCAATGATTCTAAACATGATATTGAGGATATTCCTGAACATAAACATGAATGCCAAGGTGTACATTGGTCTACAGTATTACCATCTGAGATTGTTTTAGCAGGCCGAGTACTAGCAAAGTTTTTCCAGAGAAGTGCATACGAAGATATTACATACTTTGTGAAAAGCCTGGAGCTTTTTCATTGTTATGCACGACTACCATCTGATAGCAAATTGGATTTGCATATATATGCTATTATATTGCTATACTGTCTGCTGCACTCTTGTGGTGCTAGGTTTTCCATGGATGGGGTCACTATGTCACAGGTTGTCATAATTTTTTCTCAAATCAAAGTGAACTGCATGACTATTGTTCGTATAAGATCTATAGATGCTCATGGACTACAAGTTCAGTTTGGAGAATCTCTAGCTAGTGGATGTTTAACCAGTAATGTGGAACAGGTCAGAGTGGGTAAGGCTATTTACAAATATGGCAGCTTGTTCAACCATTCTTGTCAACCAAATGTTCATGCTTATTTCCTTTCACGTACTCTGTGTATACGAACGACAGAAGTTGTAGCAGCTGGGTGTCAGCTGGAATTATCCTATGGTCCACAGGTTGGGTTCTGGGATAATAAAGATCGCCAAGCCTTTCTGAAAGACGAGTACTCATTTCAATGCCATTGCAGTGCTTGTTCGGAATTCAATCTCTCTGACATTGTCCTTAGTGCTTTTCACTGTGTCAGCCGAAATTGTTCTGGTGCAGTCTTGGACAGCAGAGTAGTCAACTGGGAAAGGCAGAAAATTAAGCACTTCCCTGGTGCTGACAAAGTTAACAGAAATGATGACATTTATGAAACCTGTCTACGTTTATTCAACCTAAATGATGGCTACGCTCATATTCAGCCTGGTTACTGTTTGAGATGTGGTTCTTACCGAAATTTAGAGTCTTTATGCGCTACAGTTGATAAAGCTTGGATATGCATCAAAAGATTGCAGGATGCGGTAATATCAAAAGAAATCTCGAATACTACTATTTCAGATGCATTAAAATCTCTTCATCTGCTGAGGTCATATTTGCATTCCTACAACAAGCGTATTGCAGAGGCAGAGGACAGCCTTGCTCTGGCCTTTTGTACGGTTGGAGAATTACAATTAGCAATGGACCATTGTAAAGCATCTTTGCTGATTCTGGAAAAGCTATATGATCCGGATGATATTGTCATTGCCTTTGAGCTTGTGAAGCTTTGTTCCATTCAAATTTGCATGGGTGATAAAACTGCACTGGAAAGCATAAGTCGAATATGTGATGTCTTCTCACGTTATTATGGACTTCATGCCCGCTCGGTATTCCCATATCTTAAATGCCTTACAGAAGCGAAGACTTTATTAGTGAGGCCTAAAGGGACTCAAGGAAAGCTTTTCCGGCAAAATAAGAACTTAGATTGGAGATTTGTATGCAGTGATCTTGTCGGCGAAGGAATTCAACAGTGA 1893 0.4031 MRRIAWIQQALHFYLFLLLFYIRSFLVDEMPQIKLQLVTTLDKGRGMISSCDIPPASLVHREEPYAMIVLKQCRETHCHYCLNDLPSDAVPCRSCSIPLYCSQQCQIQAGGQMFKINPEDHGILKSLPSDLGTYATGIILGNDSKHDIEDIPEHKHECQGVHWSTVLPSEIVLAGRVLAKFFQRSAYEDITYFVKSLELFHCYARLPSDSKLDLHIYAIILLYCLLHSCGARFSMDGVTMSQVVIIFSQIKVNCMTIVRIRSIDAHGLQVQFGESLASGCLTSNVEQVRVGKAIYKYGSLFNHSCQPNVHAYFLSRTLCIRTTEVVAAGCQLELSYGPQVGFWDNKDRQAFLKDEYSFQCHCSACSEFNLSDIVLSAFHCVSRNCSGAVLDSRVVNWERQKIKHFPGADKVNRNDDIYETCLRLFNLNDGYAHIQPGYCLRCGSYRNLESLCATVDKAWICIKRLQDAVISKEISNTTISDALKSLHLLRSYLHSYNKRIAEAEDSLALAFCTVGELQLAMDHCKASLLILEKLYDPDDIVIAFELVKLCSIQICMGDKTALESISRICDVFSRYYGLHARSVFPYLKCLTEAKTLLVRPKGTQGKLFRQNKNLDWRFVCSDLVGEGIQQ 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0186 630 Pfam SET domain 44 337 IPR001214 GO:0005515
Prci15g0186 630 Gene3D SET domain 249 336 IPR046341 -
Prci15g0186 630 Gene3D SET domain 46 76 IPR046341 -
Prci15g0186 630 ProSiteProfiles SET domain profile. 33 337 IPR001214 GO:0005515
Prci15g0186 630 Gene3D Tetratricopeptide repeat domain 344 604 IPR011990 GO:0005515
Prci15g0186 630 SUPERFAMILY SET domain 38 363 IPR046341 -
Prci15g0186 630 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 28 596 - -
Prci15g0186 630 Gene3D - 77 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0186 Prci-Chr15 1301631 1307373 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci15g0186 SET 6.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0186 K24634 - pcin:129294093 1232.24