Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0185 ATGGAGTGGAGGCTTCTGGCGTTCATCTATCTACTCTTGTCAGTTCTGATTAAAGGAGGAAAGGCATTGCGTATGGCTCCTTTGGAGGCTATTGACCTGGAGAAGAATCTGGTTGCAATATTATATATTAATCGAGCTACTGTATTGCATAAAATGAATCTTTTAACTGAGTGTTTGCGGGACTGCACTCGAGCTCTTCAGATATGTCCAAGCTATGCAAAGGCATGGTACAGGAGAGGTAAGGCGAATGTTTCATTGGGAAATTATAAAGATGCAATCTGTGATCTAAATGTGGCTAAGAGCATGGAATCATCATTGAGCGGGAAGAAACAAATAAAAGGTGAGCTTAAAAATATATTACACCAATGCGAGGGGACAAGTTCAGTGGTTCAGAATGAGAAGAATAGCTTGGATACAGCAGATGAGATGCCCCAAATAAAGCTACAGCTGGTCACCACACTTGATAAAGGACGGGGTATGATATCATCGTGTGACATACCTCCAGCTTCTTTAGTTCATCGTGAAGAACCTTATGCCATGATAGTATTAAAGCAATGCCGAGAAACACATTGCCATTACTGCTTGAATGACCTACCTTCTGATGCAGTTCCTTGTAGATCTTGTTCAATACCGCTATATTGCTCTCAGCAATGCCAGATACAGGCTGGTGGACAGATGTTTAAGATTAATCCTGAAGACCATGGCATTCTTAAAAGTCTACCCAGTGATCTTGGGACGTATGCTACAGGAATTATATTAGGCAATGATTCTAAACATGATATTGAGGATATTCCTGAACATAAACATGAATGCCAAGGTGTACATTGGTCTACAGTATTACCATCTGAGATTGTTTTAGCAGGCCGAGTACTAGCAAAGTTTTTCCAGAGAAGTGCATACGAAGATATTACATACTTTGTGAAAAGCCTGGAGCTTTTTCATTGTTATGCACGACTACCATCTGATAGCAAATTGGATTTGCATATATATGCTATTATATTGCTATACTGTCTGCTGCACTCTTGTGGTGCTAGGTTTTCCATGGATGGGGTCACTATGTCACAGGTTGTCATAATTTTTTCTCAAATCAAAGTGAACTGCATGACTATTGTTCGTATAAGATCTATAGATGCTCATGGACTACAAGTTCAGTTTGGAGAATCTCTAGCTAGTGGATGTTTAACCAGTAATGTGGAACAGGTCAGAGTGGGTAAGGCTATTTACAAATATGGCAGCTTGTTCAACCATTCTTGTCAACCAAATGTTCATGCTTATTTCCTTTCACGTACTCTGTGTATACGAACGACAGAAGTTGTAGCAGCTGGGTGTCAGCTGGAATTATCCTATGGTCCACAGGTTGGGTTCTGGGATAATAAAGATCGCCAAGCCTTTCTGAAAGACGAGTACTCATTTCAATGCCATTGCAGTGCTTGTTCGGAATTCAATCTCTCTGACATTGTCCTTAGTGCTTTTCACTGTGTCAGCCGAAATTGTTCTGGTGCAGTCTTGGACAGCAGAGTAGTCAACTGGGAAAGGCAGAAAATTAAGCACTTCCCTGGTGCTGACAAAGTTAACAGAAATGATGACATTTATGAAACCTGTCTACGTTTATTCAACCTAAATGATGGCTACGCTCATATTCAGCCTGGTTACTGTTTGAGATGTGGTTCTTACCGAAATTTAGAGTCTTTATGCGCTACAGTTGATAAAGCTTGGATATGCATCAAAAGATTGCAGGATGCGGTAATATCAAAAGAAATCTCGAATACTACTATTTCAGATGCATTAAAATCTCTTCATCTGCTGAGGTCATATTTGCATTCCTACAACAAGCGTATTGCAGAGGCAGAGGACAGCCTTGCTCTGGCCTTTTGTACGGTTGGAGAATTACAATTAGCAATGGACCATTGTAAAGCATCTTTGCTGATTCTGGAAAAGCTATATGATCCGGATGATATTGTCATTGCCTTTGAGCTTGTGAAGCTTTGTTCCATTCAAATTTGCATGGGTGATAAAACTGCACTGGAAAGCATAAGTCGAATATGTGATGTCTTCTCACGTTATTATGGACTTCATGCCCGCTCGGTATTCCCATATCTTAAATGCCTTACAGAAGCGAAGACTTTATTAGTGAGGCCTAAAGGGACTCAAGGAAAGCTTTTCCGGCAAAATAAGAACTTAGATTGGAGATTTGTATGCAGTGATCTTGTCGGCGAAGGAATTCAACAGTGA 2232 0.4041 MEWRLLAFIYLLLSVLIKGGKALRMAPLEAIDLEKNLVAILYINRATVLHKMNLLTECLRDCTRALQICPSYAKAWYRRGKANVSLGNYKDAICDLNVAKSMESSLSGKKQIKGELKNILHQCEGTSSVVQNEKNSLDTADEMPQIKLQLVTTLDKGRGMISSCDIPPASLVHREEPYAMIVLKQCRETHCHYCLNDLPSDAVPCRSCSIPLYCSQQCQIQAGGQMFKINPEDHGILKSLPSDLGTYATGIILGNDSKHDIEDIPEHKHECQGVHWSTVLPSEIVLAGRVLAKFFQRSAYEDITYFVKSLELFHCYARLPSDSKLDLHIYAIILLYCLLHSCGARFSMDGVTMSQVVIIFSQIKVNCMTIVRIRSIDAHGLQVQFGESLASGCLTSNVEQVRVGKAIYKYGSLFNHSCQPNVHAYFLSRTLCIRTTEVVAAGCQLELSYGPQVGFWDNKDRQAFLKDEYSFQCHCSACSEFNLSDIVLSAFHCVSRNCSGAVLDSRVVNWERQKIKHFPGADKVNRNDDIYETCLRLFNLNDGYAHIQPGYCLRCGSYRNLESLCATVDKAWICIKRLQDAVISKEISNTTISDALKSLHLLRSYLHSYNKRIAEAEDSLALAFCTVGELQLAMDHCKASLLILEKLYDPDDIVIAFELVKLCSIQICMGDKTALESISRICDVFSRYYGLHARSVFPYLKCLTEAKTLLVRPKGTQGKLFRQNKNLDWRFVCSDLVGEGIQQ 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0185 743 Gene3D Tetratricopeptide repeat domain 28 134 IPR011990 GO:0005515
Prci15g0185 743 ProSiteProfiles SET domain profile. 146 450 IPR001214 GO:0005515
Prci15g0185 743 SUPERFAMILY SET domain 151 476 IPR046341 -
Prci15g0185 743 Gene3D SET domain 159 189 IPR046341 -
Prci15g0185 743 Pfam SET domain 157 450 IPR001214 GO:0005515
Prci15g0185 743 Gene3D Tetratricopeptide repeat domain 456 707 IPR011990 GO:0005515
Prci15g0185 743 Gene3D - 190 222 - -
Prci15g0185 743 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 21 709 - -
Prci15g0185 743 Gene3D SET domain 362 449 IPR046341 -
Prci15g0185 743 SMART tpr_5 39 72 IPR019734 GO:0005515
Prci15g0185 743 SMART tpr_5 614 647 IPR019734 GO:0005515
Prci15g0185 743 SMART tpr_5 73 106 IPR019734 GO:0005515
Prci15g0185 743 SUPERFAMILY TPR-like 29 124 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0185 Prci-Chr15 1301631 1308579 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci15g0185 SET 9.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0185 K24634 - pcin:129294093 1468.37