Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0184 ATGAAGGCTTTGAATTGCTATACGAAGGCATTGCGTATGGCTCCTTTGGAGGCTATTGACCTGGAGAAGAATCTGGTTGCAATATTATATATTAATCGAGCTACTGTATTGCATAAAATGAATCTTTTAACTGAGTGTTTGCGGGACTGCACTCGAGCTCTTCAGATATGTCCAAGCTATGCAAAGGCATGGTACAGGAGAGGTAAGGCGAATGTTTCATTGGGAAATTATAAAGATGCAATCTGTGATCTAAATGTGGCTAAGAGCATGGAATCATCATTGAGCGGGAAGAAACAAATAAAAGGTGAGCTTAAAAATATATTACACCAATGCGAGGGGACAAGTTCAGTGGTTCAGAATGAGAAGAATAGCTTGGATACAGCAGATGAGATGCCCCAAATAAAGCTACAGCTGGTCACCACACTTGATAAAGGACGGGGTATGATATCATCGTGTGACATACCTCCAGCTTCTTTAGTTCATCGTGAAGAACCTTATGCCATGATAGTATTAAAGCAATGCCGAGAAACACATTGCCATTACTGCTTGAATGACCTACCTTCTGATGCAGTTCCTTGTAGATCTTGTTCAATACCGCTATATTGCTCTCAGCAATGCCAGATACAGGCTGGTGGACAGATGTTTAAGATTAATCCTGAAGACCATGGCATTCTTAAAAGTCTACCCAGTGATCTTGGGACGTATGCTACAGGAATTATATTAGGCAATGATTCTAAACATGATATTGAGGATATTCCTGAACATAAACATGAATGCCAAGGTGTACATTGGTCTACAGTATTACCATCTGAGATTGTTTTAGCAGGCCGAGTACTAGCAAAGTTTTTCCAGAGAAGTGCATACGAAGATATTACATACTTTGTGAAAAGCCTGGAGCTTTTTCATTGTTATGCACGACTACCATCTGATAGCAAATTGGATTTGCATATATATGCTATTATATTGCTATACTGTCTGCTGCACTCTTGTGGTGCTAGGTTTTCCATGGATGGGGTCACTATGTCACAGGTTGTCATAATTTTTTCTCAAATCAAAGTGAACTGCATGACTATTGTTCGTATAAGATCTATAGATGCTCATGGACTACAAGTTCAGTTTGGAGAATCTCTAGCTAGTGGATGTTTAACCAGTAATGTGGAACAGGTCAGAGTGGGTAAGGCTATTTACAAATATGGCAGCTTGTTCAACCATTCTTGTCAACCAAATGTTCATGCTTATTTCCTTTCACGTACTCTGTGTATACGAACGACAGAAGTTGTAGCAGCTGGGTGTCAGCTGGAATTATCCTATGGTCCACAGGTTGGGTTCTGGGATAATAAAGATCGCCAAGCCTTTCTGAAAGACGAGTACTCATTTCAATGCCATTGCAGTGCTTGTTCGGAATTCAATCTCTCTGACATTGTCCTTAGTGCTTTTCACTGTGTCAGCCGAAATTGTTCTGGTGCAGTCTTGGACAGCAGAGTAGTCAACTGGGAAAGGCAGAAAATTAAGCACTTCCCTGGTGCTGACAAAGTTAACAGAAATGATGACATTTATGAAACCTGTCTACGTTTATTCAACCTAAATGATGGCTACGCTCATATTCAGCCTGGTTACTGTTTGAGATGTGGTTCTTACCGAAATTTAGAGTCTTTATGCGCTACAGTTGATAAAGCTTGGATATGCATCAAAAGATTGCAGGATGCGGTAATATCAAAAGAAATCTCGAATACTACTATTTCAGATGCATTAAAATCTCTTCATCTGCTGAGGTCATATTTGCATTCCTACAACAAGCGTATTGCAGAGGCAGAGGACAGCCTTGCTCTGGCCTTTTGTACGGTTGGAGAATTACAATTAGCAATGGACCATTGTAAAGCATCTTTGCTGATTCTGGAAAAGCTATATGATCCGGATGATATTGTCATTGCCTTTGAGCTTGTGAAGCTTTGTTCCATTCAAATTTGCATGGGTGATAAAACTGCACTGGAAAGCATAAGTCGAATATGTGATGTCTTCTCACGTTATTATGGACTTCATGCCCGCTCGGTATTCCCATATCTTAAATGCCTTACAGAAGCGAAGACTTTATTAGTGAGGCCTAAAGGGACTCAAGGAAAGCTTTTCCGGCAAAATAAGAACTTAGATTGGAGATTTGTATGCAGTGATCTTGTCGGCGAAGGAATTCAACAGTGA 2196 0.4026 MKALNCYTKALRMAPLEAIDLEKNLVAILYINRATVLHKMNLLTECLRDCTRALQICPSYAKAWYRRGKANVSLGNYKDAICDLNVAKSMESSLSGKKQIKGELKNILHQCEGTSSVVQNEKNSLDTADEMPQIKLQLVTTLDKGRGMISSCDIPPASLVHREEPYAMIVLKQCRETHCHYCLNDLPSDAVPCRSCSIPLYCSQQCQIQAGGQMFKINPEDHGILKSLPSDLGTYATGIILGNDSKHDIEDIPEHKHECQGVHWSTVLPSEIVLAGRVLAKFFQRSAYEDITYFVKSLELFHCYARLPSDSKLDLHIYAIILLYCLLHSCGARFSMDGVTMSQVVIIFSQIKVNCMTIVRIRSIDAHGLQVQFGESLASGCLTSNVEQVRVGKAIYKYGSLFNHSCQPNVHAYFLSRTLCIRTTEVVAAGCQLELSYGPQVGFWDNKDRQAFLKDEYSFQCHCSACSEFNLSDIVLSAFHCVSRNCSGAVLDSRVVNWERQKIKHFPGADKVNRNDDIYETCLRLFNLNDGYAHIQPGYCLRCGSYRNLESLCATVDKAWICIKRLQDAVISKEISNTTISDALKSLHLLRSYLHSYNKRIAEAEDSLALAFCTVGELQLAMDHCKASLLILEKLYDPDDIVIAFELVKLCSIQICMGDKTALESISRICDVFSRYYGLHARSVFPYLKCLTEAKTLLVRPKGTQGKLFRQNKNLDWRFVCSDLVGEGIQQ 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0184 731 SUPERFAMILY SET domain 139 464 IPR046341 -
Prci15g0184 731 Gene3D Tetratricopeptide repeat domain 444 695 IPR011990 GO:0005515
Prci15g0184 731 Gene3D Tetratricopeptide repeat domain 1 122 IPR011990 GO:0005515
Prci15g0184 731 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 697 - -
Prci15g0184 731 SUPERFAMILY TPR-like 2 112 IPR011990 GO:0005515
Prci15g0184 731 Gene3D SET domain 350 437 IPR046341 -
Prci15g0184 731 SMART tpr_5 27 60 IPR019734 GO:0005515
Prci15g0184 731 SMART tpr_5 602 635 IPR019734 GO:0005515
Prci15g0184 731 SMART tpr_5 61 94 IPR019734 GO:0005515
Prci15g0184 731 Pfam SET domain 145 438 IPR001214 GO:0005515
Prci15g0184 731 ProSiteProfiles SET domain profile. 134 438 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0184 Prci-Chr15 1301631 1308815 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci15g0184 SET 9.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0184 K24634 - pcin:129294093 1485.7