Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0183 ATGGAGACTCTGAAAGCTGCAATCCCGGAGAGCCTGAGGCGAATGATTGGAGAGAGCACTACAGATGATCTTCCCACCACATGTGCTTCTCTTCACCATTTCTTTCTTCATTTTGAGCCCTTTCACCAAATGGTGAGTGACTTAGCAGACCCCAAAGATGCTTTATGTGGTAAGAGTGAGACCGCTGCTTTGGAGTCCAAGCAGCTTGGCAACCATTACTTCTTGAAAGGAGATTATATGAAGGCTTTGAATTGCTATACGAAGGCATTGCGTATGGCTCCTTTGGAGGCTATTGACCTGGAGAAGAATCTGGTTGCAATATTATATATTAATCGAGCTACTGTATTGCATAAAATGAATCTTTTAACTGAGTGTTTGCGGGACTGCACTCGAGCTCTTCAGATATGTCCAAGCTATGCAAAGGCATGGTACAGGAGAGGTAAGGCGAATGTTTCATTGGGAAATTATAAAGATGCAATCTGTGATCTAAATGTGGCTAAGAGCATGGAATCATCATTGAGCGGGAAGAAACAAATAAAAGGTGAGCTTAAAAATATATTACACCAATGCGAGGGGACAAGTTCAGTGGTTCAGAATGAGAAGAATAGCTTGGATACAGCAGATGAGATGCCCCAAATAAAGCTACAGCTGGTCACCACACTTGATAAAGGACGGGGTATGATATCATCGTGTGACATACCTCCAGCTTCTTTAGTTCATCGTGAAGAACCTTATGCCATGATAGTATTAAAGCAATGCCGAGAAACACATTGCCATTACTGCTTGAATGACCTACCTTCTGATGCAGTTCCTTGTAGATCTTGTTCAATACCGCTATATTGCTCTCAGCAATGCCAGATACAGGCTGGTGGACAGATGTTTAAGATTAATCCTGAAGACCATGGCATTCTTAAAAGTCTACCCAGTGATCTTGGGACGTATGCTACAGGAATTATATTAGGCAATGATTCTAAACATGATATTGAGGATATTCCTGAACATAAACATGAATGCCAAGGTGTACATTGGTCTACAGTATTACCATCTGAGATTGTTTTAGCAGGCCGAGTACTAGCAAAGTTTTTCCAGAGAAGTGCATACGAAGATATTACATACTTTGTGAAAAGCCTGGAGCTTTTTCATTGTTATGCACGACTACCATCTGATAGCAAATTGGATTTGCATATATATGCTATTATATTGCTATACTGTCTGCTGCACTCTTGTGGTGCTAGGTTTTCCATGGATGGGGTCACTATGTCACAGGTTGTCATAATTTTTTCTCAAATCAAAGTGAACTGCATGACTATTGTTCGTATAAGATCTATAGATGCTCATGGACTACAAGTTCAGTTTGGAGAATCTCTAGCTAGTGGATGTTTAACCAGTAATGTGGAACAGGTCAGAGTGGGTAAGGCTATTTACAAATATGGCAGCTTGTTCAACCATTCTTGTCAACCAAATGTTCATGCTTATTTCCTTTCACGTACTCTGTGTATACGAACGACAGAAGTTGTAGCAGCTGGGTGTCAGCTGGAATTATCCTATGGTCCACAGGTTGGGTTCTGGGATAATAAAGATCGCCAAGCCTTTCTGAAAGACGAGTACTCATTTCAATGCCATTGCAGTGCTTGTTCGGAATTCAATCTCTCTGACATTGTCCTTAGTGCTTTTCACTGTGTCAGCCGAAATTGTTCTGGTGCAGTCTTGGACAGCAGAGTAGTCAACTGGGAAAGGCAGAAAATTAAGCACTTCCCTGGTGCTGACAAAGTTAACAGAAATGATGACATTTATGAAACCTGTCTACGTTTATTCAACCTAAATGATGGCTACGCTCATATTCAGCCTGGTTACTGTTTGAGATGTGGTTCTTACCGAAATTTAGAGTCTTTATGCGCTACAGTTGATAAAGCTTGGATATGCATCAAAAGATTGCAGGATGCGGTAATATCAAAAGAAATCTCGAATACTACTATTTCAGATGCATTAAAATCTCTTCATCTGCTGAGGTCATATTTGCATTCCTACAACAAGCGTATTGCAGAGGCAGAGGACAGCCTTGCTCTGGCCTTTTGTACGGTTGGAGAATTACAATTAGCAATGGACCATTGTAAAGCATCTTTGCTGATTCTGGAAAAGCTATATGATCCGGATGATATTGTCATTGCCTTTGAGCTTGTGAAGCTTTGTTCCATTCAAATTTGCATGGGTGATAAAACTGCACTGGAAAGCATAAGTCGAATATGTGATGTCTTCTCACGTTATTATGGACTTCATGCCCGCTCGGTATTCCCATATCTTAAATGCCTTACAGAAGCGAAGACTTTATTAGTGAGGCCTAAAGGGACTCAAGGAAAGCTTTTCCGGCAAAATAAGAACTTAGATTGGAGTGATCTTGTCGGCGAAGGAATTCAACAGTGA 2421 0.4089 METLKAAIPESLRRMIGESTTDDLPTTCASLHHFFLHFEPFHQMVSDLADPKDALCGKSETAALESKQLGNHYFLKGDYMKALNCYTKALRMAPLEAIDLEKNLVAILYINRATVLHKMNLLTECLRDCTRALQICPSYAKAWYRRGKANVSLGNYKDAICDLNVAKSMESSLSGKKQIKGELKNILHQCEGTSSVVQNEKNSLDTADEMPQIKLQLVTTLDKGRGMISSCDIPPASLVHREEPYAMIVLKQCRETHCHYCLNDLPSDAVPCRSCSIPLYCSQQCQIQAGGQMFKINPEDHGILKSLPSDLGTYATGIILGNDSKHDIEDIPEHKHECQGVHWSTVLPSEIVLAGRVLAKFFQRSAYEDITYFVKSLELFHCYARLPSDSKLDLHIYAIILLYCLLHSCGARFSMDGVTMSQVVIIFSQIKVNCMTIVRIRSIDAHGLQVQFGESLASGCLTSNVEQVRVGKAIYKYGSLFNHSCQPNVHAYFLSRTLCIRTTEVVAAGCQLELSYGPQVGFWDNKDRQAFLKDEYSFQCHCSACSEFNLSDIVLSAFHCVSRNCSGAVLDSRVVNWERQKIKHFPGADKVNRNDDIYETCLRLFNLNDGYAHIQPGYCLRCGSYRNLESLCATVDKAWICIKRLQDAVISKEISNTTISDALKSLHLLRSYLHSYNKRIAEAEDSLALAFCTVGELQLAMDHCKASLLILEKLYDPDDIVIAFELVKLCSIQICMGDKTALESISRICDVFSRYYGLHARSVFPYLKCLTEAKTLLVRPKGTQGKLFRQNKNLDWSDLVGEGIQQ 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0183 806 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Prci15g0183 806 SUPERFAMILY SET domain 218 543 IPR046341 -
Prci15g0183 806 Gene3D SET domain 226 256 IPR046341 -
Prci15g0183 806 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 776 - -
Prci15g0183 806 Pfam SET domain 224 517 IPR001214 GO:0005515
Prci15g0183 806 Gene3D - 257 289 - -
Prci15g0183 806 Gene3D SET domain 426 516 IPR046341 -
Prci15g0183 806 Gene3D Tetratricopeptide repeat domain 38 201 IPR011990 GO:0005515
Prci15g0183 806 ProSiteProfiles SET domain profile. 213 517 IPR001214 GO:0005515
Prci15g0183 806 Gene3D Tetratricopeptide repeat domain 523 774 IPR011990 GO:0005515
Prci15g0183 806 SMART tpr_5 106 139 IPR019734 GO:0005515
Prci15g0183 806 SMART tpr_5 63 96 IPR019734 GO:0005515
Prci15g0183 806 SMART tpr_5 140 173 IPR019734 GO:0005515
Prci15g0183 806 SMART tpr_5 681 714 IPR019734 GO:0005515
Prci15g0183 806 SUPERFAMILY TPR-like 63 191 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0183 Prci-Chr15 1301631 1308888 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci15g0183 SET 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0183 K24634 - pcin:129294093 1625.53