Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0181 ATGGAGACTCTGAAAGCTGCAATCCCGGAGAGCCTGAGGCGAATGATTGGAGAGAGCACTACAGATGATCTTCCCACCACATGTGCTTCTCTTCACCATTTCTTTCTTCATTTTGAGCCCTTTCACCAAATGGTGAGTGACTTAGCAGACCCCAAAGATGCTTTATGTGGTAAGAGTGAGACCGCTGCTTTGGAGTCCAAGCAGCTTGGCAACCATTACTTCTTGAAAGGAGATTATATGAAGGCTTTGAATTGCTATACGAAGGCATTGCGTATGGCTCCTTTGGAGGCTATTGACCTGGAGAAGAATCTGGTTGCAATATTATATATTAATCGAGCTACTGTATTGCATAAAATGAATCTTTTAACTGAGTGTTTGCGGGACTGCACTCGAGCTCTTCAGATATGTCCAAGCTATGCAAAGGCATGGTACAGGAGAGGTAAGGCGAATGTTTCATTGGGAAATTATAAAGATGCAATCTGTGATCTAAATGTGGCTAAGAGCATGGAATCATCATTGAGCGGGAAGAAACAAATAAAAGGTGAGCTTAAAAATATATTACACCAATGCGAGGGGACAAGTTCAGTGGTTCAGAATGAGAAGAATAGCTTGGATACAGCAGATGAGATGCCCCAAATAAAGCTACAGCTGGTCACCACACTTGATAAAGGACGGGGTATGATATCATCGTGTGACATACCTCCAGCTTCTTTAGTTCATCGTGAAGAACCTTATGCCATGATAGTATTAAAGCAATGCCGAGAAACACATTGCCATTACTGCTTGAATGACCTACCTTCTGATGCAGTTCCTTGTAGATCTTGTTCAATACCGCTATATTGCTCTCAGCAATGCCAGATACAGGCTGGTGGACAGATGTTTAAGATTAATCCTGAAGACCATGGCATTCTTAAAAGTCTACCCAGTGATCTTGGGACGTATGCTACAGGAATTATATTAGGCAATGATTCTAAACATGATATTGAGGATATTCCTGAACATAAACATGAATGCCAAGGTGTACATTGGTCTACAGTATTACCATCTGAGATTGTTTTAGCAGGCCGAGTACTAGCAAAGTTTTTCCAGAGAAGTGCATACGAAGATATTACATACTTTGTGAAAAGCCTGGAGCTTTTTCATTGTTATGCACGACTACCATCTGATAGCAAATTGGATTTGCATATATATGCTATTATATTGCTATACTGTCTGCTGCACTCTTGTGGTGCTAGGTTTTCCATGGATGGGGTCACTATGTCACAGGTTGTCATAATTTTTTCTCAAATCAAAGTGAACTGCATGACTATTGTTCGTATAAGATCTATAGATGCTCATGGACTACAAGTTCAGTTTGGAGAATCTCTAGCTAGTGGATGTTTAACCAGTAATGTGGAACAGGTCAGAGTGGGTAAGGCTATTTACAAATATGGCAGCTTGTTCAACCATTCTTGTCAACCAAATGTTCATGCTTATTTCCTTTCACGTACTCTGTGTATACGAACGACAGAAGTTGTAGCAGCTGGGTGTCAGCTGGAATTATCCTATGGTCCACAGGTTGGGTTCTGGGATAATAAAGATCGCCAAGCCTTTCTGAAAGACGAGTACTCATTTCAATGCCATTGCAGTGCTTGTTCGGAATTCAATCTCTCTGACATTGTCCTTAGTGCTTTTCACTGTGTCAGCCGAAATTGTTCTGGTGCAGTCTTGGACAGCAGAGTAGTCAACTGGGAAAGGCAGAAAATTAAGCACTTCCCTGGTGCTGACAAAGTTAACAGAAATGATGACATTTATGAAACCTGTCTACGTTTATTCAACCTAAATGATGGCTACGCTCATATTCAGCCTGGTTACTGTTTGAGATGTGGTTCTTACCGAAATTTAGAGTCTTTATGCGCTACAGTTGATAAAGCTTGGATATGCATCAAAAGATTGCAGGATGCGGTAATATCAAAAGAAATCTCGAATACTACTATTTCAGATGCATTAAAATCTCTTCATCTGCTGAGGTCATATTTGCATTCCTACAACAAGCGTATTGCAGAGGCAGAGGACAGCCTTGCTCTGGCCTTTTGTACGGTTGGAGAATTACAATTAGCAATGGACCATTGTAAAGCATCTTTGCTGATTCTGGAAAAGCTATATGATCCGGATGATATTGTCATTGCCTTTGAGCTTGTGAAGCTTTGTTCCATTCAAATTTGCATGGGTGATAAAACTGCACTGGAAAGCATAAGTCGAATATGTGATGTCTTCTCACGTTATTATGGACTTCATGCCCGCTCGGTATTCCCATATCTTAAATGCCTTACAGAAGCGAAGACTTTATTAGTGAGGCCTAAAGGGACTCAAGGAAAGCTTTTCCGGCAAAATAAGAACTTAGATTGGAGATTTGTATGCAGTGATCTTGTCGGCGAAGGAATTCAACAGTGA 2433 0.4085 METLKAAIPESLRRMIGESTTDDLPTTCASLHHFFLHFEPFHQMVSDLADPKDALCGKSETAALESKQLGNHYFLKGDYMKALNCYTKALRMAPLEAIDLEKNLVAILYINRATVLHKMNLLTECLRDCTRALQICPSYAKAWYRRGKANVSLGNYKDAICDLNVAKSMESSLSGKKQIKGELKNILHQCEGTSSVVQNEKNSLDTADEMPQIKLQLVTTLDKGRGMISSCDIPPASLVHREEPYAMIVLKQCRETHCHYCLNDLPSDAVPCRSCSIPLYCSQQCQIQAGGQMFKINPEDHGILKSLPSDLGTYATGIILGNDSKHDIEDIPEHKHECQGVHWSTVLPSEIVLAGRVLAKFFQRSAYEDITYFVKSLELFHCYARLPSDSKLDLHIYAIILLYCLLHSCGARFSMDGVTMSQVVIIFSQIKVNCMTIVRIRSIDAHGLQVQFGESLASGCLTSNVEQVRVGKAIYKYGSLFNHSCQPNVHAYFLSRTLCIRTTEVVAAGCQLELSYGPQVGFWDNKDRQAFLKDEYSFQCHCSACSEFNLSDIVLSAFHCVSRNCSGAVLDSRVVNWERQKIKHFPGADKVNRNDDIYETCLRLFNLNDGYAHIQPGYCLRCGSYRNLESLCATVDKAWICIKRLQDAVISKEISNTTISDALKSLHLLRSYLHSYNKRIAEAEDSLALAFCTVGELQLAMDHCKASLLILEKLYDPDDIVIAFELVKLCSIQICMGDKTALESISRICDVFSRYYGLHARSVFPYLKCLTEAKTLLVRPKGTQGKLFRQNKNLDWRFVCSDLVGEGIQQ 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0181 810 ProSiteProfiles TPR repeat profile. 63 96 IPR019734 GO:0005515
Prci15g0181 810 SUPERFAMILY SET domain 218 543 IPR046341 -
Prci15g0181 810 Gene3D SET domain 226 256 IPR046341 -
Prci15g0181 810 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 776 - -
Prci15g0181 810 Pfam SET domain 224 517 IPR001214 GO:0005515
Prci15g0181 810 Gene3D - 257 289 - -
Prci15g0181 810 Gene3D SET domain 426 516 IPR046341 -
Prci15g0181 810 ProSiteProfiles SET domain profile. 213 517 IPR001214 GO:0005515
Prci15g0181 810 Gene3D Tetratricopeptide repeat domain 523 774 IPR011990 GO:0005515
Prci15g0181 810 Gene3D Tetratricopeptide repeat domain 38 201 IPR011990 GO:0005515
Prci15g0181 810 SMART tpr_5 106 139 IPR019734 GO:0005515
Prci15g0181 810 SMART tpr_5 63 96 IPR019734 GO:0005515
Prci15g0181 810 SMART tpr_5 681 714 IPR019734 GO:0005515
Prci15g0181 810 SMART tpr_5 140 173 IPR019734 GO:0005515
Prci15g0181 810 SUPERFAMILY TPR-like 63 191 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0181 Prci-Chr15 1301631 1308893 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci15g0181 SET 1.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0181 K24634 - pcin:129294093 1640.55