Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci15g0161 | ATGGGCAGACGAAAACAAAGTAGACCCCATCGATCTGGCGGGATAGTACTAGAAACACAGGCAACTGTTGCAACAGAATTGGATAAACAGAAAGTGCTGGAAACTGGGGGACAAGCGAGGGAGGATTTTGGTGAAGTTCACAATCCCTACTTTGTGGAAGTTGATAGGTCCGGTTGGTTCTCAAACGAACACCTTGATATTTCTGAAGTTGTTCTAACTGATTTGAAGATGAGAGAAGGTTTTTCGGGTTTTGAACTTTCCGATGACTTTTATCAGGATTTCCAACATTCTCTAAGATTTCAGGTGTTTAATGCCAATCAGATCCTTGGTCGAATTAAACTAGGCCATTGGCCTATATTGGCTTCTTCTGATATTCATCTAGAGTTTGTAAAAAGAGTAATGGATCATGGGGAAACATGTACGGTGCTGTTATCTGGGGTTTTTGATGGACCTGATGAAGGTGTCTCTGGTCTTATTCACTTGGCAAGTTTGAAATTTCTTACATTGAGGCCAGTTCTTGGGAGTAGATTTTCTGAAGACATGCCCTCCCTTAGATTAAGGGTTGAGATACTAAAGGGTGCCTTTGATGCATGTGAATCACTTCTAGACAGTTCCAGACAACTATGGAAGAAGAGTATGATGAATGTCATGTCTTGGCTACGCCCTGAAATTATGACGTCCGAGGTTAGATATGGGGTGGGTTGCTATATGAAAGTGGAAGTTGATCCACAGACTGAGATCAGGGATGATACTCGCTATACCCAGAAACATGTGAACTTTAACCCAGCAGGTTTCTATGAAGCCATTAGGCCTTCAAAATCAGAACCAATGCTTCAGGAAGACATACCTGACTTACTTCCTGAATTGAGACCATATCAAAGGCGTGCAGCTTTTTGGATGGTAGAGAGAGAGAAAAAAAGAGCTGGAGGTCAGGGGGAAAGAGAGAGAAGTCATTTTCATTCTCCTTTGTGTGTGCCCGTGGATTTTATTGACATGAGCTCTAAAATGTTCTTTAATCCATTCAGTGGAAATATTTCATTGTACCCAGAGACTCATGCACCTTGTGTGGTTGGAGGCATTCTTGCAGATGAAATGGGTTTGGGCAAAACTGTTGAACTACTTGCTTGCATCTTTGCTCATCAGAGATCAGCATCTGAAAGTGACATTCTTGTTGACTCAAAGGTGCAGGTTAATGAGGATCATAAGGTGAATTTTAAAAGACTCAAAAGAGATCGTGTGGAGTGTACATGTGGAGCTGTGAGTGAAAGTCTCAAATATAAGGGTCTATGGGTTCAGTGTGACATTTGTGATGCTTGGCAACATGCAGATTGTGTTGGTTATTCTCCCAAAGGAAAATCACTGAAATCAAAAGAGGGATCTGAAAGCAAGAAATTTAAAACCACCATAGCTGTAAGGGATGGGGATTATGTATGCCAAATATGCTCAGAACTAATACAAGCTACTGAATCTCCTATTGCTTCTGGTGCCACTCTTATTGTTTGTCCAGCTCCTATTTTGTCCCAGTGGCATGATGAAATTATCCGTCATACACGTCCAGGCTCCTTGAAAACGTATATTTATGAAGGTGTGCGAGACACATCTTTCACCAATACATCTATGATGAATATCAGTGAACTTGCTTCTGCGGACATTGTATTAACAACATACGATGTACTTAAAGAGGATCTGTCTCATGATTATGATAGGCATGAAGGTGATCGGCACTTTTTGAGATTTCAAAAAAGGTACCCAGTTGTCCCCACTCTTCTCACAAGAATATCCTGGTGGAGAATTTGCCTGGATGAGGCTCAAATGGTGGAGAGTAATGCTGCAGCTGCCACTGAAATGGCACTGCGGCTCAATGCAAAGTATCATTGGTGCATTACGGGAACCCCCATTCAGCGAAAGCTTGACGACTTGCATGGATTATTACGATTCCTTAAAGCTAGTCCTTTTGATATTTACCGTTGGTGGGCTGATGTTATTCGGGATCCTTATGAGAAGGGAGATATTGGAGCTATGGAATTTACACATAAAATGTTCAAACAAGTCATGTGGCGCTCTTCAAAAGAACATGTTGCAGATGAGTTGCAGCTTCCTTCTCAGGAGGAATGCCTCACTTGGCTCTCTCTCTCACCAGTAGAAGTGCACTTTTACCAAAGGCAACATGAAACTTGTGTTAACTATGTTCATGAAATTATTGACAGTTTGAGAAATGACATTCTTAATAGAAGTGTTCCAGGTTCTGTTTCTTCAGATGATTTTTCTGATTCCTTCATAACTCACACAGAGGCTGGGAAGTTATTGAATGCTCTGCTGAAGCTTCGTCAGGCTTGTTGTCACCCCCAGGTTGGAAGCTCTGGGTTGCGCTCTCTGCAACAGTCCCCGATGACCATGGAGGAAATACTGATGGTCCTTATAAGTAAGACTAAGATAGAAGGTGAGGAAGCTCTCAGGAGGTCAGTTGTTGCTTTAAATGGACTTGCTGCTATAAGCATAATGCAGAAGGATTTTTCTCAAGCAGCATTGCTGTACATTGAAGCACTGACTTTAGCCGAAGACCATTCTGAAGATTTCCGCCTAGATCCTTTGTTAAATATTCACATTCATTATAATCTGGCCGAAATACTTCCACTAACTACAAACATTTCACTTGAGCTCCCCTGCAAAGGAAGGCAGTTCTCTAGAACTTCACAACTTAAGTCAACGAAAAAGCATATTCTTGAAGAGGTTGATTGTTCTTTTGTTAAGAAGAAGAAAGGGAATGACTCTGATGATATATATTTCAAAATGGCTTCTGGAGAACCATTGAACAGTACACCTAGCTTTTCAGAAAATGACTTAAAGAGGCACCAGGAAGTTAATGATTCATCTACAAGTTCTTTACAGTTTTTGAAAGCAGAATGTGAAGATTTGAAACATAAATACTTATCTGTGTTCAGTTCAAAGCTATCTGCAGTCCAACAGGAGTTTCAGAAAGTGTATTTGCAGGTCTGCAATGCATATAGTGAGAGTACAAATGAGCCCACAATTTGGTGGTTAGAAGCACTTCATCATGCTGAACAGAACAAGGATTTTTCCGATGAGTTGCTTAGGAAGATTGAAGAAGCAATTGCAGGAACTTTGAACAATTCAAAGCCACCAAGAGTTACTGCTCGTTTCCGGAGCATACACTCTCTGAAGTATCAAATCCAGACAAGTTTGGATCAATTAGAAGCTTCTAGGAATGTGCTATTTGATCGAATTTTGGAAATTGATCAGACTATGGACAAACCAAAAGAAGAGGACATTGAACGTGATTATGAAGCAAGGCTCTTTGTTCTAAAGAATGAACGTGGAGGAATAATTTCATCTGCTGAGGAGGCAGTGGATCTGCAGAAGAAAAATTTTGCACTGAATCGTTTCCTTTCAAAGCTATCACAATCTAATCACATTTCAAAAACATCTGATATTGGCTATGAAGAATCAAGAAAAAGAAATGTTGGAGAAAGAGTTGTGGTTTCAAGATCAGCATCTCAATTGGAAGTTATTCTTGGTGTGTTAAAGACCTATTGCAAAGCTCGGTTGGGAAAGGATAGTGTTTCAACAGCCACCAAACATTTACATATTTTTGAGGGTATGCGAAAGGAGTTTGGCCATGCAAGGTCTTTGGCTTTAGCCCAAGCTCAATATCTGCGTGCCCATGATGAAATTAAGATGGCAGTTTCCCGGTTGCACCTAAAGGCAAATGAAAATGACAAGTCTCTTGATGCTTTAGGTGAAAATGAATTATGTGCAGCAAGTTCAAACTTTTCCCATGATAAGTTTTTGTCTTTGGCCTCATTGTCACAAGTAAAAGGAAAACTTCGCTACTTAAAGGGTTTGGTACAATTGAAACAACGGCCATTGGAGCATGCAGAAAGTTCTTCATTTACTCAGGTGGCTACTGCAATGTCAAATTTCACAGAAGAGAAATGCATGCCTGCATCTAAAGCTGATGAGGATTCATGCCCAGTTTGCCAAGAAAAGCTGGGCAGCCAGAAAATGGTTTTTCAGTGTGGGCATGTCACATGTTGTAAATGTTTATTTGCTATGACAGAGCAAAGGCTCCAAAATAGCAAGTTTCATAAATGGGTTATGTGTCCAACATGTCGACAGCACACTGATTTTGGTAACATTGCATATGCTGTTGATAGACAGCATGAATCTTTCAAAACTTCTGTGCTGCAGAATGTTGACAACAGTGAGAAATGTGAATCATCCATCAGCGTTAAAGGTTCCTACGGAACTAAGATTGAAGCAGTCACTAAAAGAATCTTGTGGATCAAGTCTACAGACCCTAAAGCAAAAGTCCTCGTGTTTTCTAGCTGGAATGATGTTCTTGATGTATTGGAACATGCTTTTGCTGTCAATAATATCACCTACATTCGGATGAAAGGAGGCAGAAAATCTCATGTTGCCATCAGTCAATTTAAAGGGCAGCAAAATGACGAAAGAGGAACATCCCAGGAATCGACATCAAAATTTATTCAGGTTTTATTAATTTTGATTCAACATGGAGCTAATGGCCTCAATCTTCTGGAAGCACAGCATGTGGTCCTTGTGGAGCCATTACTCAATCCTGCTGCTGAAGCACAAGCAATCAGTCGTGTGCATAGAATTGGGCAGAAAAATAAGACTCTCATTCATCGTTTCATTGTAAGTGGTAGTGAAGTATTCATAGCAAGCAATGGTATATGTAGAGGACTGAAATTCATCAGTGTCTGTCGATCAACTAATTCTCCGTACTCAATATCAGCTATTAACATCTTTAGAGGACTGAACATTGTCAGAGTAAGAAGTATAAGCTTCAAGCCTGTAGTCTACAATTGTATAAAGTTGCACCCCACCCCCAGCGGGCGGGCTGCGAAATTGCTTCAACACTTAATATTAGATATATTAGTTAGTGTAACTTAA | 4935 | 0.4041 | MGRRKQSRPHRSGGIVLETQATVATELDKQKVLETGGQAREDFGEVHNPYFVEVDRSGWFSNEHLDISEVVLTDLKMREGFSGFELSDDFYQDFQHSLRFQVFNANQILGRIKLGHWPILASSDIHLEFVKRVMDHGETCTVLLSGVFDGPDEGVSGLIHLASLKFLTLRPVLGSRFSEDMPSLRLRVEILKGAFDACESLLDSSRQLWKKSMMNVMSWLRPEIMTSEVRYGVGCYMKVEVDPQTEIRDDTRYTQKHVNFNPAGFYEAIRPSKSEPMLQEDIPDLLPELRPYQRRAAFWMVEREKKRAGGQGERERSHFHSPLCVPVDFIDMSSKMFFNPFSGNISLYPETHAPCVVGGILADEMGLGKTVELLACIFAHQRSASESDILVDSKVQVNEDHKVNFKRLKRDRVECTCGAVSESLKYKGLWVQCDICDAWQHADCVGYSPKGKSLKSKEGSESKKFKTTIAVRDGDYVCQICSELIQATESPIASGATLIVCPAPILSQWHDEIIRHTRPGSLKTYIYEGVRDTSFTNTSMMNISELASADIVLTTYDVLKEDLSHDYDRHEGDRHFLRFQKRYPVVPTLLTRISWWRICLDEAQMVESNAAAATEMALRLNAKYHWCITGTPIQRKLDDLHGLLRFLKASPFDIYRWWADVIRDPYEKGDIGAMEFTHKMFKQVMWRSSKEHVADELQLPSQEECLTWLSLSPVEVHFYQRQHETCVNYVHEIIDSLRNDILNRSVPGSVSSDDFSDSFITHTEAGKLLNALLKLRQACCHPQVGSSGLRSLQQSPMTMEEILMVLISKTKIEGEEALRRSVVALNGLAAISIMQKDFSQAALLYIEALTLAEDHSEDFRLDPLLNIHIHYNLAEILPLTTNISLELPCKGRQFSRTSQLKSTKKHILEEVDCSFVKKKKGNDSDDIYFKMASGEPLNSTPSFSENDLKRHQEVNDSSTSSLQFLKAECEDLKHKYLSVFSSKLSAVQQEFQKVYLQVCNAYSESTNEPTIWWLEALHHAEQNKDFSDELLRKIEEAIAGTLNNSKPPRVTARFRSIHSLKYQIQTSLDQLEASRNVLFDRILEIDQTMDKPKEEDIERDYEARLFVLKNERGGIISSAEEAVDLQKKNFALNRFLSKLSQSNHISKTSDIGYEESRKRNVGERVVVSRSASQLEVILGVLKTYCKARLGKDSVSTATKHLHIFEGMRKEFGHARSLALAQAQYLRAHDEIKMAVSRLHLKANENDKSLDALGENELCAASSNFSHDKFLSLASLSQVKGKLRYLKGLVQLKQRPLEHAESSSFTQVATAMSNFTEEKCMPASKADEDSCPVCQEKLGSQKMVFQCGHVTCCKCLFAMTEQRLQNSKFHKWVMCPTCRQHTDFGNIAYAVDRQHESFKTSVLQNVDNSEKCESSISVKGSYGTKIEAVTKRILWIKSTDPKAKVLVFSSWNDVLDVLEHAFAVNNITYIRMKGGRKSHVAISQFKGQQNDERGTSQESTSKFIQVLLILIQHGANGLNLLEAQHVVLVEPLLNPAAEAQAISRVHRIGQKNKTLIHRFIVSGSEVFIASNGICRGLKFISVCRSTNSPYSISAINIFRGLNIVRVRSISFKPVVYNCIKLHPTPSGRAAKLLQHLILDILVSVT | 1644 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci15g0161 | 1644 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER | 1 | 1562 | - | - | |
| Prci15g0161 | 1644 | SMART | ring_2 | 1330 | 1377 | IPR001841 | - | |
| Prci15g0161 | 1644 | CDD | SF2_C_SNF | 1421 | 1559 | - | - | |
| Prci15g0161 | 1644 | CDD | DEXQc_SHPRH | 289 | 688 | - | - | |
| Prci15g0161 | 1644 | SUPERFAMILY | RING/U-box | 1316 | 1382 | - | - | |
| Prci15g0161 | 1644 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 594 | 1564 | IPR027417 | - | |
| Prci15g0161 | 1644 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 400 | 481 | IPR013083 | - | |
| Prci15g0161 | 1644 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 487 | 650 | IPR014001 | - | |
| Prci15g0161 | 1644 | CDD | PHD_TCF19_like | 417 | 481 | - | - | |
| Prci15g0161 | 1644 | SUPERFAMILY | FYVE/PHD zinc finger | 411 | 483 | IPR011011 | - |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci15g0161 | K15710 | - | gmx:100776659 | 2381.67 |
Showing 1 to 1 of 1 entries