Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0154 ATGGCAAATTCCAGAAAGCAGAAAGACCTAGAAACCATGGAAGAGGCCACCAGTTCTTTAATACGCCGTGCTTGTGAATTAGCTAGAAACCTAGGATCAAATTTCGCCCACTTAGCTTACCTGCAGCCTGATGTACTGTTGGCGTCCATTGATGAGACAGTGACGACGTTTTCGGCCGCTAGAGAAAGCCTGCGACTGTTTTCCCTACACCCAACTTCTGATTCAACGGCGGTTTGGCCAGTTAGGTCCCCCGGTCATGCACGGCCAATGGATCAGTCGACTCATGATCAAATGCAACAATCAGCAGCAGCAAAGATGCAGCAACGAATGCAAAAGACGAGGAAAAATGAATCGGAGACGAAGACAGTGATGGCACCTGCGCCTAGGTATGGAAACACAGAGATACCGCCAGATGATGGCTTCACTTGGCGAAAATATGGCCAGAAAGAGATTTTTGGCTCTACCCACCCGAGGAGTTATTACAGGTGCACCCACCAGAAATCATACAAATGTCCGGCGAAGAAGCAAGTGCAGCGACTGGATGACAACCCTAACACCTTTGCTGTAACATACCGAGGCAGTCACACCTGCATTCTCTCCTCCACCGCTCCCTCCCCCATCCCTCCTCCCCACCTCTTCCTCCATCACTTCAACTCTACTTGA 663 0.5008 MANSRKQKDLETMEEATSSLIRRACELARNLGSNFAHLAYLQPDVLLASIDETVTTFSAARESLRLFSLHPTSDSTAVWPVRSPGHARPMDQSTHDQMQQSAAAKMQQRMQKTRKNESETKTVMAPAPRYGNTEIPPDDGFTWRKYGQKEIFGSTHPRSYYRCTHQKSYKCPAKKQVQRLDDNPNTFAVTYRGSHTCILSSTAPSPIPPPHLFLHHFNST 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0154 220 Pfam WRKY DNA -binding domain 138 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci15g0154 220 Gene3D WRKY domain 128 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci15g0154 220 SUPERFAMILY WRKY DNA-binding domain 134 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci15g0154 220 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 202 IPR044810 GO:0003700
Prci15g0154 220 SMART WRKY_cls 137 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci15g0154 220 ProSiteProfiles WRKY domain profile. 138 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0154 Prci-Chr15 1165272 1168101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0154 13 208 WRKY Transcription Factor Family AT2G40740 40.000 6.09e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci15g0154 WRKY 1.8e-26 CL0274