Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0144 ATGACTTTCAAGAGAAGGAATGGTGGTCGCAACAAGCATGGCCGTGGACACGTTAAATTCATTCGCTGCTCCAACTGTGGCAAATGTTGCCCCCAGGACAAGTCAATTAAGAGGTTTCTTGTGAGGAACATTGTTGAGCAAGCTGCAGTTAGGGATGTTCAGGAAGCCTGTGTATATGACCAATACACCCTTCCCAAGCTATATGTTAAGATGCAATATTGCGTGTCCTGCGCAATTCACTCCCATGTTGTGAGGGTTCGATCTCGCACAGATAGGAGGAACCGTGAACCCCCACAGCGCTTTATCAGGCGCAGGGATGATCTACCAAGGCCTGGTCAGCCTGGGCAAGCGCCCCGTCCTGCGGGAGCTGGAGCTCCTGCCCGTGCCTAA 390 0.5205 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPQDKSIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDLPRPGQPGQAPRPAGAGAPARA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0144 129 MobiDBLite consensus disorder prediction 89 110 - -
Prci15g0144 129 FunFam 40S ribosomal protein S26 1 114 - -
Prci15g0144 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Prci15g0144 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Prci15g0144 129 MobiDBLite consensus disorder prediction 86 129 - -
Prci15g0144 129 Pfam Ribosomal protein S26e 1 105 IPR000892 GO:0003735|GO:0005840|GO:0006412
Prci15g0144 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0144 Prci-Chr15 1118917 1120829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0144 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 81.897 3.17e-68 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0144 K02976 - mnt:112092936 207.223