Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0128 ATGAATCTGATGAGTTTTCTAGGATGGCGTGTTTGTGATCTGGATTTTGAAGATCTTACTTATCCAGATCTGATTGTTGACGGGAAAGACTGTCCAATTATTTTTGTGGTGTACGAAGTTTATCAAGTGGAAGGTGGTTTCCTGTACAAAATTACTGAACTCTCTGTGACAAACCGGGCCATGGGCGTTTACGATCAAGGTTCTAACATCACTTCTTTGCCAATGGATTCTTCTAGGAAGAGGAAAAGTCGAAGTAGGCGCGATGGTTCTAAATCTGTGGCTGAGACTCTTGCAAAGTGGAAAGAATACAATGAATATCTCGAGTCTAGCAAAGGTGAGAGTAAACCAACTCGCAGAGCCCCGGCCAAAGGTTCAAAGAAAGGATGTATGAAGGGTAAGGGAGGGCCTGACAACTCAAGATGTAACTACAGAGGCGTTAGACAGAGAACCTGGGGAAAATGGGTCGCTGAGATTAGGGAACCAAACAGAGGAAGTAGGCTGTGGTTGGGCACGTTCGCTACTGCATACGAAGCTGCTCTTGCTTATGATGAAGCTGCTAGAGCCATGTACGGTGCTTGTGCCCGCCTCAATTTTCCTCACATATCGGATCATACTTCTTGCAAGGAATCCCTCAAGGACTTTTCACCGGCTACAACTTTATCAAGTTCTTCAGTGGCAACTCCTGCTGGTTCGGACACAACAACCATGTCAAATCATTCCGAGGTCTGTGCGGCTGAGGATGTCAAGACAACACATCAACCTACCAAAATCAAGGATGTGGACGATGTGCGTCTCGAAGCTGATGAAGTTGCCTCTGCAAATATCAAAGTGAAGTCGGAACCAAAGGATGGGTCTGTCGATCTCACAGATCATGAGTGCGGGGGGTGTCAATTTGTGAAACCACAAGAACCCGGGATTAGAAGGGATGGCAATGATGAAAGTAAGGATCTAATGGACTATTCTTGGCTTGAAGGGAATGGTTTGGATGGTGATTACTTGCAGAATTTCTCTATGGACGAGATGTTTGACGTGGATGAACTTTTGGGGGCTATGGACAAGAATCCAATTGGTGACTCTGAAACGTTTGGTTGTGGTCAAATGGGCCACGCTGGAGACGGAAACCTCAAGAGTGAAATGCCATCAAGCTTCTCCTATGAACTGCAGAACCCCGATGCCAAGCTGCTGGGAAGTCTGCACCACATGGAACAGACACCATCAGATGTTGATTATGGTTTTGATTTTTTGAAAATAGAGGAGCCAGAGAACAATAGTAGTAGAGAGGATGAACCGCAATTTCTTGATTTCAGATTACCAGATCTGTGA 1323 0.4535 MNLMSFLGWRVCDLDFEDLTYPDLIVDGKDCPIIFVVYEVYQVEGGFLYKITELSVTNRAMGVYDQGSNITSLPMDSSRKRKSRSRRDGSKSVAETLAKWKEYNEYLESSKGESKPTRRAPAKGSKKGCMKGKGGPDNSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFATAYEAALAYDEAARAMYGACARLNFPHISDHTSCKESLKDFSPATTLSSSSVATPAGSDTTTMSNHSEVCAAEDVKTTHQPTKIKDVDDVRLEADEVASANIKVKSEPKDGSVDLTDHECGGCQFVKPQEPGIRRDGNDESKDLMDYSWLEGNGLDGDYLQNFSMDEMFDVDELLGAMDKNPIGDSETFGCGQMGHAGDGNLKSEMPSSFSYELQNPDAKLLGSLHHMEQTPSDVDYGFDFLKIEEPENNSSREDEPQFLDFRLPDL 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0128 440 MobiDBLite consensus disorder prediction 77 93 - -
Prci15g0128 440 MobiDBLite consensus disorder prediction 419 440 - -
Prci15g0128 440 MobiDBLite consensus disorder prediction 218 237 - -
Prci15g0128 440 MobiDBLite consensus disorder prediction 111 141 - -
Prci15g0128 440 Pfam AP2 domain 141 191 IPR001471 GO:0003700|GO:0006355
Prci15g0128 440 ProSiteProfiles AP2/ERF domain profile. 142 199 IPR001471 GO:0003700|GO:0006355
Prci15g0128 440 FunFam Ethylene-responsive transcription factor 2 141 200 - -
Prci15g0128 440 Gene3D AP2/ERF domain 142 201 IPR036955 GO:0003700|GO:0006355
Prci15g0128 440 SUPERFAMILY DNA-binding domain 142 200 IPR016177 GO:0003677
Prci15g0128 440 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 78 414 - -
Prci15g0128 440 MobiDBLite consensus disorder prediction 72 93 - -
Prci15g0128 440 CDD AP2 141 200 IPR001471 GO:0003700|GO:0006355
Prci15g0128 440 PRINTS Ethylene responsive element binding protein signature 165 181 IPR001471 GO:0003700|GO:0006355
Prci15g0128 440 PRINTS Ethylene responsive element binding protein signature 143 154 IPR001471 GO:0003700|GO:0006355
Prci15g0128 440 SMART rav1_2 142 205 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0128 Prci-Chr15 939245 941402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0128 79 440 AP2-EREBP Transcription Factor Family AT2G40340 41.622 5.20e-78 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci15g0128 AP2 4.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0128 - K09286 pcin:129294142 874.004