Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0126 ATGGGCGTTTACGATCAAGGTTCTAACATCACTTCTTTGCCAATGGATTCTTCTAGGAAGAGGAAAAGTCGAAGTAGGCGCGATGGTTCTAAATCTGTGGCTGAGACTCTTGCAAAGTGGAAAGAATACAATGAATATCTCGAGTCTAGCAAAGGTGAGAGTAAACCAACTCGCAGAGCCCCGGCCAAAGGTTCAAAGAAAGGATGTATGAAGGGTAAGGGAGGGCCTGACAACTCAAGATGTAACTACAGAGGCGTTAGACAGAGAACCTGGGGAAAATGGGTCGCTGAGATTAGGGAACCAAACAGAGGAAGTAGGCTGTGGTTGGGCACGTTCGCTACTGCATACGAAGCTGCTCTTGCTTATGATGAAGCTGCTAGAGCCATGTACGGTGCTTGTGCCCGCCTCAATTTTCCTCACATATCGGATCATACTTCTTGCAAGGAATCCCTCAAGGACTTTTCACCGGCTACAACTTTATCAAGTTCTTCAGTGGCAACTCCTGCTGGTTCGGACACAACAACCATGTCAAATCATTCCGAGGTCTGTGCGGCTGAGGATGTCAAGACAACACATCAACCTACCAAAATCAAGGATGTGGACGATGTGCGTCTCGAAGCTGATGAAGTTGCCTCTGCAAATATCAAAGTGAAGTCGGAACCAAAGGATGGGTCTGTCGATCTCACAGATCATGAGTGCGGGGGGTGTCAATTTGTGAAACCACAAGAACCCGGGATTAGAAGGGATGGCAATGATGAAAGTAAGGATCTAATGGACTATTCTTGGCTTGAAGGGAATGGTTTGGATGGTGATTACTTGCAGAATTTCTCTATGGACGAGATGTTTGACGTGGATGAACTTTTGGGGGCTATGGACAAGAATCCAATTGGTGACTCTGAAACGTTTGGTTGTGGTCAAATGGGCCACGCTGGAGACGGAAACCTCAAGAGTGAAATGCCATCAAGCTTCTCCTATGAACTGCAGAACCCCGATGCCAAGCTGCTGGGAAGTCTGCACCACATGGAACAGACACCATCAGATGTTGATTATGGTTTTGATTTTTTGAAAATAGAGGAGCCAGAGAACAATAGTAGTAGAGAGGATGAACCGCAATTTCTTGATTTCAGATTACCAGATCTGTGA 1143 0.4619 MGVYDQGSNITSLPMDSSRKRKSRSRRDGSKSVAETLAKWKEYNEYLESSKGESKPTRRAPAKGSKKGCMKGKGGPDNSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFATAYEAALAYDEAARAMYGACARLNFPHISDHTSCKESLKDFSPATTLSSSSVATPAGSDTTTMSNHSEVCAAEDVKTTHQPTKIKDVDDVRLEADEVASANIKVKSEPKDGSVDLTDHECGGCQFVKPQEPGIRRDGNDESKDLMDYSWLEGNGLDGDYLQNFSMDEMFDVDELLGAMDKNPIGDSETFGCGQMGHAGDGNLKSEMPSSFSYELQNPDAKLLGSLHHMEQTPSDVDYGFDFLKIEEPENNSSREDEPQFLDFRLPDL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0126 380 MobiDBLite consensus disorder prediction 158 177 - -
Prci15g0126 380 MobiDBLite consensus disorder prediction 359 380 - -
Prci15g0126 380 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Prci15g0126 380 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 18 356 - -
Prci15g0126 380 MobiDBLite consensus disorder prediction 47 81 - -
Prci15g0126 380 MobiDBLite consensus disorder prediction 1 34 - -
Prci15g0126 380 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Prci15g0126 380 ProSiteProfiles AP2/ERF domain profile. 82 139 IPR001471 GO:0003700|GO:0006355
Prci15g0126 380 MobiDBLite consensus disorder prediction 1 16 - -
Prci15g0126 380 CDD AP2 81 140 IPR001471 GO:0003700|GO:0006355
Prci15g0126 380 MobiDBLite consensus disorder prediction 17 34 - -
Prci15g0126 380 SMART rav1_2 82 145 IPR001471 GO:0003700|GO:0006355
Prci15g0126 380 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Prci15g0126 380 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Prci15g0126 380 Gene3D AP2/ERF domain 82 141 IPR036955 GO:0003700|GO:0006355
Prci15g0126 380 FunFam Ethylene-responsive transcription factor 2 81 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0126 Prci-Chr15 939245 941693 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0126 19 380 AP2-EREBP Transcription Factor Family AT2G40340 41.622 4.11e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci15g0126 AP2 3.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0126 - K09286 pcin:129294142 750.355