Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0111 ATGGGAAGCTCGGTGCGGGTCCAAGCAGCCGTCGTCATAACTCCTTCTGATCCAACTCCATCTTGTGTTCTCGCCCTCTCCGCTCTCGACTCTCAACTCTTCCTTCGTTTCACTATAGAGTACCTCTTGATCTACAGATCCTGCCCTGGCCTGGACCGCGGGGCCACCTCGGCTCGACTCCAAGCCGCATTAGCTCAAGCTTTGGTTCCGTACTACCCGTTTGCCGGGAGGGTCAGGCCAAGCCTCGGTGGTTCCGGCCTCGAGGTCGTGTGCAGAGCCCAGGGTGCGTCGTTCATTGAGGCCTTTTCTGACCGTTACAAAGCCAGCGACTTCTATAAAGCCCCCAAAACGGTTACTTCCTGGAGAAAACTCTTGTCCCTCTACACGGCTGATGTTCTCAAAGGATCACCGCCGCTAGTGGTTCAGCTCACGTGGCTCAACGACGGAGCCGCGGCAGTCGGTGTGGGGATCAATCATTGTGTTTGCGACGGTATCGGCAGCGCCGAGTTTCTCAATTGTTTCGCTGAGTTGGCTTCTGGGAAATGCCCGGCACTCCGGCCGACACCCCTTTGGAACCGTCACCTTCTCAACCCATCGCACGGGAGTCCCGGTCGGGCCAGCCGGACAATCCTCCCCGAGTTCACCCGGGTACCCGATCTGTGCGACTTCGTGACGCGGGTTTCCAGCGATCTCAAACCAACCTCTATCATATTCGACAAAAGACGCCTGAACGAGCTCAAGAACGTGGCTTGGTCGATGAGTCCACTCAGCGAGTCTTCCTACACGTCCTTCGAGGTCCTGGCGGCTCATGTATGGAGAAGCTGGGCTAGAGCTTTGGCTTTTCCTTCGAACCAAATCCTAAAGCTGCTCTTCAGCATCAACGTGCGGAACCGGGTGAAGCCGGGCATGCCCCAAGGGTACTACGGGAACGCGTTCGTGTTAGGATGCGCCCAGAGCAGCGCGAGGGAGCTGGTGCACATGGGTCTGGGGTACGGGTCGGGTCTGGTGAGGAGGGCAAAGGAGAGAGTGGACAACGAATACGTGAGGGAGGTGGTGGAGCAGGTGTTCGAGTCGAGGGCGAGTCCGGACTTGGTGGGGGTGCTGATCGTGTCCCAGTGGTCAAGGCTGGGCTTGGAAAGGGTTGACTTCGGGGTGGGAAAGCCAGTCCATGTGGGACCCATATGCTGCGATCGGTATTGTCTGTTTTTGCCGGTGAATGATGAGAGGGATGCTGTGAAGGTCATGGTGGCTGTCCCTACCTCTGCCGTTGACCAGTACCAATATTTCCTCAGAGCTTCTCATTTATGA 1308 0.5726 MGSSVRVQAAVVITPSDPTPSCVLALSALDSQLFLRFTIEYLLIYRSCPGLDRGATSARLQAALAQALVPYYPFAGRVRPSLGGSGLEVVCRAQGASFIEAFSDRYKASDFYKAPKTVTSWRKLLSLYTADVLKGSPPLVVQLTWLNDGAAAVGVGINHCVCDGIGSAEFLNCFAELASGKCPALRPTPLWNRHLLNPSHGSPGRASRTILPEFTRVPDLCDFVTRVSSDLKPTSIIFDKRRLNELKNVAWSMSPLSESSYTSFEVLAAHVWRSWARALAFPSNQILKLLFSINVRNRVKPGMPQGYYGNAFVLGCAQSSARELVHMGLGYGSGLVRRAKERVDNEYVREVVEQVFESRASPDLVGVLIVSQWSRLGLERVDFGVGKPVHVGPICCDRYCLFLPVNDERDAVKVMVAVPTSAVDQYQYFLRASHL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0111 435 Gene3D - 2 207 IPR023213 -
Prci15g0111 435 Pfam Transferase family 5 423 - -
Prci15g0111 435 Gene3D - 225 429 IPR023213 -
Prci15g0111 435 PANTHER ACYL TRANSFERASE 4 4 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0111 Prci-Chr15 822025 823533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0111 5 430 Monolignol Biosynthesis Gene Families AT5G48930 26.591 5.30e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0111 - - gmx:100817048 614.379