Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0098 ATGGCTGCTTCCGACGTCGGAGCTGTCCTAGAATTCTTGAGGAACAATGGCTTCACAGAGGCAGAGTCCGCCCTTAAAGAGGACATCATAGAAAATGGTGAGACGGGGTCGTTCGACTACGAGAAATTCTTCTTCCCGATGGTGCCGCCTCCGCCGCCGGTCAGAGTCAAATCGTTTTCTCGATTTTCGGATAGGCAGTATGGCAGAGATTGCTCGAAAGCAAGCTCTAAGTCGTCGGACGATGAGTTTGTGAGCTTGGGGTCATCTACTTCGGGCGTTTGTTGTGCGGAATTCATCAATCCATATGGAACTCGCTCCTCATCTCAAACTCACAAAGATTCTGAATCTTCGTCAGATAGATTATCTCAATTTGACACAGCACGTGACTACCATGACTTTGACATGCAAAATGAACCATACTGGTATAATGAGAAAGATGATGATGATTTCATGACCCCCAGTTTTGAGGGACCAGAGTTCTTTGGAGGTCAAAGTGAGGATAAGTTCATCCTGACATCAGAAATGGAGAATCAACATGAAAATCTTCTGGAAAATAATTACAAAAGTGAAGCATTCCAAGTGGAGAGAAATGGTGATTGCATGGAGAGACTATGCCTTTATAATCGTTCTGATGTAGGAAATGAGAATGTGACTTGTTTAAAAGACTATTGTCATGCTGATAAGAAAGAGCAGCTTGAAGGAGGATTAGTTAGAGAGGTTGAGAATCCTACCTTTGTCAATAATTGTGATGTTCCATTTAGCAAATACTCTGCAGGTTCAGGAGAGTCTTGTAGTGGGGATCCTGGTAATGACAGCTACCTAAGCTTAAAGGAAATTCATCTGAATGATTTGCATTTAAAGGTTGTTGGGGATAGTTCCTCTACTGATTCTGCTCCAGAGCATTCTATGAACCAAACTTTTGACTTCTATCCTAACAGTAATGGCAATAAGGGGTACAAAGCTCCCTATGACTTAACTATCAAAGTTGCTGAAACTGACCTGCCAAATGGACTCACCAGATATAAAGCTAAAGATTGTGGAGAATTCACTGAAGAATGCCTAGATCCAGAAAATGCAGCAGATGGAGAGGATGTTACTGATGATGAGCTATTAAAGTACACTCACGAGGATGAATATGAAGTATTTGACCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGATCTGCTCATTGTGCTGAATTCAGTCATAGGCGGCAGGTACTATGTAACAGAATATCTGGGTTCGGCTGCCTTCAGTAAGGTTGTTCAGGCACATGATCTTCTGACAGGAATAGATGTCTGCTTGAAGATTATAAAAAATGACAAAGACTTTTTTGACCAAAGCTTGGATGAAATTAAACTTCTAAAGCTTGTCAATAAGAATGACCCAGCTGATGAACACCACATATTGCGACTTTATGATTATTTCTATCATCAGGAGCATCTATTCATTGTTACTGAGCTTCTGCGAGCAAACCTATATGAGTTTCAAAAATACAATCAAGAATCTGGTGATGAGGCATATTTTACATTGAACAGGTTGCAGCTCATTACTCGTCAATGTTTGGAGGCCTTGCAATACTTGCATAGCTTGGGAATAATTCACTGTGACCTGAAGCCAGAAAATATTCTTATCAGAAGTTACAAAAGATGTGAGATTAAAATTATTGATCTAGGTAGCAGTTGCTTCCAATCAGACAATTTATGCCTATATGTACAGTCACGATCCTATAGGGCCCCTGAAGTGATGCTAGGCCTCCAATATGATGAAAAGATTGACATATGGTCTCTTGGCTGTATTTTGGCTGAGCTATGCTCTGGTGAAGTGCTCTTTCCAAATGAAGCTGTTACAATAATTCTTGCGCGCATGATTGGAATGCTTGGTCCTATTGATCTGGAGATGTTAGTGAGGGGGCAGGAAACATGCAAATATTTCACAAAAGAATATGATATTTACCATGTAAATGAGGAGACAAACCAATTGGAGTACATAATTCCAGAGGAATGGTCCTTGGAGCAGCACCTGCAGGTTTCTGACACGATGTTTATTGACTTTGTCAGATTCTTGCTCAGCACCAATCCCATAAGGCGACCAACTGCAAGACAGGCACTCAAGCATCCATGGCTTGCACATGCTTATGACTCCCAGTAG 2169 0.4112 MAASDVGAVLEFLRNNGFTEAESALKEDIIENGETGSFDYEKFFFPMVPPPPPVRVKSFSRFSDRQYGRDCSKASSKSSDDEFVSLGSSTSGVCCAEFINPYGTRSSSQTHKDSESSSDRLSQFDTARDYHDFDMQNEPYWYNEKDDDDFMTPSFEGPEFFGGQSEDKFILTSEMENQHENLLENNYKSEAFQVERNGDCMERLCLYNRSDVGNENVTCLKDYCHADKKEQLEGGLVREVENPTFVNNCDVPFSKYSAGSGESCSGDPGNDSYLSLKEIHLNDLHLKVVGDSSSTDSAPEHSMNQTFDFYPNSNGNKGYKAPYDLTIKVAETDLPNGLTRYKAKDCGEFTEECLDPENAADGEDVTDDELLKYTHEDEYEVFDLRIIHRKNRTGFEESKDLLIVLNSVIGGRYYVTEYLGSAAFSKVVQAHDLLTGIDVCLKIIKNDKDFFDQSLDEIKLLKLVNKNDPADEHHILRLYDYFYHQEHLFIVTELLRANLYEFQKYNQESGDEAYFTLNRLQLITRQCLEALQYLHSLGIIHCDLKPENILIRSYKRCEIKIIDLGSSCFQSDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNEAVTIILARMIGMLGPIDLEMLVRGQETCKYFTKEYDIYHVNEETNQLEYIIPEEWSLEQHLQVSDTMFIDFVRFLLSTNPIRRPTARQALKHPWLAHAYDSQ 722
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0098 722 Pfam Protein kinase domain 415 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0098 722 SMART serkin_6 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0098 722 CDD PKc_DYRK_like 413 715 - -
Prci15g0098 722 SUPERFAMILY Protein kinase-like (PK-like) 405 719 IPR011009 -
Prci15g0098 722 FunFam Putative serine/threonine-protein kinase dyrk2 407 494 - -
Prci15g0098 722 Gene3D Phosphorylase Kinase; domain 1 407 494 - -
Prci15g0098 722 FunFam Serine/threonine-protein kinase ppk15 492 716 - -
Prci15g0098 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Prci15g0098 722 Gene3D Transferase(Phosphotransferase) domain 1 467 715 - -
Prci15g0098 722 ProSiteProfiles Protein kinase domain profile. 413 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci15g0098 722 PANTHER DUAL SPECIFICITY PROTEIN KINASE 107 715 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Prci15g0098 Prci-Chr15 682954 687672 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0098 410 710 MAP Kinase Gene Family AT5G19010 31.776 1.50e-32 131
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Prci15g0098 Pkinase 2e-51 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0098 - - gmx:100783988 1058.9