Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0089 ATGATGGCAAATTACTATGACATTGGTGACATTATCACAGAGAAAGAGATTGTATCAGGTATATTCCAAAAGGCAGCATCAGGAGTGGGAATAGATCCCAGTTCTGAAACTGACTATATTGAAACAGGTTCCAAAGTGGAGATGCCTTTCTGGCTTGCTTATGAGCTACAACTGAGACAAGTAGTATCTATCAATGTTCCCCCTTGTTTCGATCAAAAAACAAGACTCGAGATTCAGGCTGACTGTGCTAGTGTGGATCTGAGGTCTCGATGTCCATTCTTTTATGAATTTGGATGCAAGATAGCACCCGTGGTTGGTGATCGGACCATTGGGTTTCTTCTCTTGTCTGCATTTAAGAATAGGTACAAGGAAATCCTCACCAAGGCACATTCTGCATCATTTTCAGCTGCTTCCAAATTCTGGTCAATTCTAACAAAAGAAGAGGTCAATTTGTATAATGCAGCTCAATCCTCAATGGCGTCCTTCAAGAAGTGGCGAATTGGGGGACCTAGATTTCAGATAGCCTCAGTTCTTGGAAGAAAGAGGAAATCAACCGAGTAG 561 0.4189 MMANYYDIGDIITEKEIVSGIFQKAASGVGIDPSSETDYIETGSKVEMPFWLAYELQLRQVVSINVPPCFDQKTRLEIQADCASVDLRSRCPFFYEFGCKIAPVVGDRTIGFLLLSAFKNRYKEILTKAHSASFSAASKFWSILTKEEVNLYNAAQSSMASFKKWRIGGPRFQIASVLGRKRKSTE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0089 186 SUPERFAMILY GINS helical bundle-like 66 167 IPR036224 -
Prci15g0089 186 SUPERFAMILY PriA/YqbF domain 1 67 - -
Prci15g0089 186 CDD GINS_B_Psf3 5 67 - -
Prci15g0089 186 Gene3D - 1 168 IPR038437 -
Prci15g0089 186 CDD GINS_A_psf3 62 168 - -
Prci15g0089 186 PANTHER UNCHARACTERIZED 2 185 IPR010492 -
Prci15g0089 186 Pfam GINS complex protein 46 148 IPR021151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0089 Prci-Chr15 633663 637592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0089 2 185 Core DNA Replication Machinery Family AT3G55490 67.935 1.16e-94 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0089 K10734 - gmx:100799874 300.056