Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci15g0083 | ATGTCAGGCTTTTGTGGGAGTGACGGCGGCGGGACCAAGTGCGGGCGTTGGAATCCCACAGCGGACCAGCTCAGGTTTCTGACTCACCTCTTCGCCTCTGGTCTCCGAACTCCCACCACCGACCAGATCCAGAACATCTCCTCTCTCCTCAGCTTTTACGGCCACATCGAGAGCAAGAATGTCTTCTATTGGTTCCAGAACCATAAAGCCCGCGAACGCCTCCGACGTCGCAATTCATCGTCTTCACCAAAGAGTAGTGGGAATCCAGCGGCGCCGGAGACGCTTCAACTCTTCCCCTTGGACTCGTTGGGAGAATCACAGATGGGGAAGCTGAGGGTGCATGCTAATTGCAGGGACCATACCGGCGAATCAACGGAGCAACCTCCCTTGGACCTCCGCTTGAGCTTTCTCTAA | 414 | 0.5604 | MSGFCGSDGGGTKCGRWNPTADQLRFLTHLFASGLRTPTTDQIQNISSLLSFYGHIESKNVFYWFQNHKARERLRRRNSSSSPKSSGNPAAPETLQLFPLDSLGESQMGKLRVHANCRDHTGESTEQPPLDLRLSFL | 137 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci15g0083 | 137 | SUPERFAMILY | Homeodomain-like | 15 | 75 | IPR009057 | - | |
| Prci15g0083 | 137 | MobiDBLite | consensus disorder prediction | 73 | 99 | - | - | |
| Prci15g0083 | 137 | CDD | homeodomain | 16 | 70 | IPR001356 | GO:0003677 | |
| Prci15g0083 | 137 | Gene3D | - | 13 | 80 | - | - | |
| Prci15g0083 | 137 | Pfam | Homeodomain | 14 | 73 | IPR001356 | GO:0003677 | |
| Prci15g0083 | 137 | PANTHER | WUSCHEL-RELATED HOMEOBOX 1-RELATED | 7 | 82 | IPR044555 | GO:0003700|GO:0099402 | |
| Prci15g0083 | 137 | ProSiteProfiles | 'Homeobox' domain profile. | 10 | 75 | IPR001356 | GO:0003677 | |
| Prci15g0083 | 137 | SMART | HOX_1 | 12 | 79 | IPR001356 | GO:0003677 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Prci15g0083 | Prci-Chr15 | 532187 | 533133 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci15g0083 | 9 | 137 | Wox Gene Family | AT3G11260 | 49.398 | 1.41e-44 | 142 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | HB-WOX | Prci15g0083 | Homeodomain | 2e-16 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci15g0083 | - | - | pcin:129294115 | 263.848 |