Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0082 ATGCCTTCTTCTACACCCTCTCTGGTTTCCAAATGCACCGTTTTCCCTGACCGGAACTCCACTATCGGAGACCTCAAGCTCTCCGTCTCCGACCTTGCCATGCTTTCCTGTCACTACATCCAGAAGGGTTGCCTCTTCAACCTTCCTCCCGGTTCTCTCCCTTTTCATTCTTTCATTCCTCTCCTCAAGTCCTCTCTCGCTCGCACTCTCTCGCTCTTTCCTCCTCTCGCCGGCCGCTTGAAGACCGATTCCGATGGCTATGTCTTCATCGACTGCAACGATGCTGGCGTCGATTTCGTTCATGTCACTGCCACCGGATTCTTCATCCACGACCTCTTGGCCCCGCCCGATGTCCCCGAATCTTTCAAGGAATTCTTCGCTTTTGACAGGAAAGTTAGTTACTGCGGTCATGTCAGCCCGATTTTGGCTGTTCAGGTCACCGAGCTCGCAGACGGCGTTTTCATCGGCTGCTCCGTCAACCACGCCGTCACAGACGGGACCTCCTTCTGGAATTTCTTCAATACTTTCGCCCAAGTCTTCAGAGGAGTCGACAATATTTCCAAGGTGCCGGACTTCCGGAGGGAGTCCGTTCTCATCTCGGAAGCGGTGCTCCGTTTGCCAGAGGGTGGGCCCAAGGTCAACTTCAACGCCAACGGACCATTGCGGGAGCGAATTTTCAGCTTTAGCCGCGGAGCAATTCAAAAGCTGAAAGCCAGAACAAATAACAGGAGGCGGACAGGCAACCATAACGGGGATGTCATTAATGCTTTAGAGCTGACGGGGAAGCAGCGAAACGATCCTTTCCAGGAGGAGGACAGGATAGTAAGGTCCAGGGTCAAGAGTGCAGTTGCTGAAACGGGGGAGATATCGTCGTTCCAGTCGCTTTGTGCACTACTGTGGAGGGCGGTAACGCGAGCCAGGAAGATGTCAGCGTCGAAAATGACAACATTCAGAATGGCGGTTAACTGTCGGCAAAGGCTGGAGCCCAAATTAGATCAGTACTACTTCGGGAATGCGATTCAGAGCATACCGACGTACGCGTCCGCAGGCGACGTAGTGTCAAGGGATTTGCGGTGGTGCGCGGAGCAACTGAACAAGAACGTGAAGGCGCACGACGACGCTACGGTGAGGCGGTTCGTAGAGGAGTGGGAGAGGAACCCGAGGTGTTTCCCCCTGGGGAATCCTGACGGTGCATCCATCACCATGGGGAGCTCCCCGAGATTCCCAATGTACGACAATGATTTCGGGTGGGGCAGACCCGTAGCGATTCGGAGCGGTGGGGCCAACAAATTTGACGGGAAGATCTCGGCTTTTCCCGGCAGGGAAGGCAGCGGGAGCGTTGATCTGGAGGTTGTGTTGGCGCCCGAAACCATGGCGGGACTGGAGTCGGACTCGGAGTTCCTGCGATACGCGTCGTCGTTTCTGTTATGA 1431 0.5507 MPSSTPSLVSKCTVFPDRNSTIGDLKLSVSDLAMLSCHYIQKGCLFNLPPGSLPFHSFIPLLKSSLARTLSLFPPLAGRLKTDSDGYVFIDCNDAGVDFVHVTATGFFIHDLLAPPDVPESFKEFFAFDRKVSYCGHVSPILAVQVTELADGVFIGCSVNHAVTDGTSFWNFFNTFAQVFRGVDNISKVPDFRRESVLISEAVLRLPEGGPKVNFNANGPLRERIFSFSRGAIQKLKARTNNRRRTGNHNGDVINALELTGKQRNDPFQEEDRIVRSRVKSAVAETGEISSFQSLCALLWRAVTRARKMSASKMTTFRMAVNCRQRLEPKLDQYYFGNAIQSIPTYASAGDVVSRDLRWCAEQLNKNVKAHDDATVRRFVEEWERNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPVAIRSGGANKFDGKISAFPGREGSGSVDLEVVLAPETMAGLESDSEFLRYASSFLL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0082 476 Gene3D - 7 203 IPR023213 -
Prci15g0082 476 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 468 - -
Prci15g0082 476 Pfam Transferase family 10 467 - -
Prci15g0082 476 Gene3D - 221 467 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0082 Prci-Chr15 524703 526415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0082 14 462 Monolignol Biosynthesis Gene Families AT5G48930 28.970 9.80e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0082 - - gmx:100500612 708.753